| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 21.34 (cM) |
| QTL Span: | 21.34-21.34 (cM)
20.1-20.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81476406 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | 0.055 |
| Associated Gene: | CCDC113 (coiled-coil domain containing 113) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Italian Large White pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 v2 Beadchip and analyzed for meat quality and carcass traits. A total of 38,147 SNPs were used for analysis. |
| Analysis: | For GWAS, an additive polygenic model was fitted with a genomic relationship matrix. |
| Software: | PLINK, GenABEL in R, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fabbri M C, Zappaterra M, Davoli R, Zambonelli P |
| Affiliation: | Department of Agricultural and Food Sciences (DISTAL), Bologna University, Viale G. Fanin 46, Bologna, 40127, Italy |
| Title: | Genome-wide association study identifies markers associated with carcass and meat quality traits in Italian Large White pigs |
| Journal: | Animal Genetics, 2020, 51(6):950-952 |
| Links: |
PubMed | Abstract | List all data
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