Release 56
(Apr 24, 2025)

QTL 21520 Description:

 Trait Information
Trait name: Meat color Vertebrate Trait Ontology: n/a
Trait details: meat color score Product Trait Ontology: Meat color
Symbol: MCOL Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:18
QTL Peak Location:28.71 (cM)
QTL Span:28.71-28.71 (cM)
20.7-20.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs45434571
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:0.24
Additive effect:-0.09
Associated Gene:ARF5 (ADP-ribosylation factor 5)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a commercial purebred Duroc population.
     Breeds associated:
    Design:Animals were genotyped for 81 SNPs in 80 candidate genes mapped to putative QTL regions from a previous study. Association analysis for 33 of the SNP with meat quality traits was performed.
    Analysis:Linear mixed models were used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Choi I, Bates RO, Raney NE, Steibel JP, Ernst CW
    Affiliation:Department of Animal Science, Michigan State University, East Lansing, MI 48824-1225, USA.
    Title:Evaluation of QTL for carcass merit and meat quality traits in a US commercial Duroc population.
    Journal:Meat science, 2012, 92 (2): 132-8
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22578477
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  • Cite this Data:

    Animal QTLdb: QTL21520 was published in 2012, and was curated into QTLdb on 2013-07-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:21520

     

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