| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
173.3-173.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81349161 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were purebred Duroc pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Neogen GGP 50K Porcine v1 Genotyping BeadChip and analyzed for intramuscular fat and backfat thickness. A total of 43,127 SNPs were used for analysis. |
| Analysis: | Single-step genomic BLUP was used for GWAS. |
| Software: | Beagle, BLUPF90, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang Z, Zhang Z, Oyelami F O, Sun H, Xu Z, Ma P, Wang Q, Pan Y |
| Affiliation: | Department of Animal Science, College of Animal Science, Zhejiang University, 866# Yuhangtang Road, Hangzhou, East, 310058, China |
| Title: | Identification of genes related to intramuscular fat independent of backfat thickness in Duroc pigs using single-step genome-wide association |
| Journal: | Animal Genetics, 2021, 52(1):108-113 |
| Links: |
PubMed | Abstract | List all data
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