Release 56
(Apr 24, 2025)

QTL 218757 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: backfat thickness adjusted to 100 kg Product Trait Ontology: n/a
Symbol: BFT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
44.5-45.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs81358137
Peak:
Lower, "Significant":rs81225732
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:n/a
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCE1.33%
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Duroc pigs.
     Breeds associated:
    Design:Animals were genotyped using the GeneSeek porcine 50K SNP chip and analyzed for growth traits. A total of 35,851 SNPs were used for analysis.
    Analysis:Weighted single-step GWAS was performed.
    Software:PLINK, BLUPF90
    Notes: 
    Links:Edit

     Reference
    Authors:Ruan D, Zhuang Z, Ding R, Qiu Y, Zhou S, Wu J, Xu C, Hong L, Huang S, Zheng E, Cai G, Wu Z, Yang J
    Affiliation:Lingnan Guangdong Laboratory of Modern Agriculture, Guangzhou 510642, China
    Title:Weighted Single-Step GWAS Identified Candidate Genes Associated with Growth Traits in a Duroc Pig Population
    Journal:Genes, 2021, 12(1):117
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #33477978
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  • Cite this Data:

    Animal QTLdb: QTL218757 was published in 2021, and was curated into QTLdb on 2021-03-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:218757

     

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