| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 6.44 (cM) |
| QTL Span: | 6.44-6.44 (cM)
8.9-8.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81270678 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.54E-5 | | Dominance effect: | n/a |
| Additive effect: | -0.093 |
| Associated Gene: | CHRM1 (cholinergic receptor, muscarinic 1) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #21929
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were White Duroc x Erhualian or Chinese Sutai pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60K BeadChip and analyzed for meat quality traits. A final set of 39414 (Duroc x Erhualian) or 44532 (Sutai) SNPs was used for analysis. |
| Analysis: | A generalized linear mixed model was used. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ma J, Yang J, Zhou L, Zhang Z, Ma H, Xie X, Zhang F, Xiong X, Cui L, Yang H, Liu X, Duan Y, Xiao S, Ai H, Ren J, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, China |
| Title: | Genome-wide association study of meat quality traits in a White Duroc × Erhualian F2 intercross and Chinese Sutai pigs |
| Journal: | PloS one, 2013, 8 (5): e64047 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #23724019
Add your comments
Note similar findings
Note contradictions
|
