Release 56
(Apr 24, 2025)

QTL 220137 Description:

 Trait Information
Trait name: Muscle pH Vertebrate Trait Ontology: Muscle pH regulation trait
Trait details: pH 45 minutes post-mortem (longissimus) Product Trait Ontology: Meat pH
Symbol: MPH Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
0.6-0.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs342685612
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Genome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a commercial crossbred Duroc x (Landrace x Yorkshire) pig population.
     Breeds associated:
    Design:Pigs were genotyped using the GeneSeek Porcine 50K SNP BeadChip and analyzed for meat quality traits. A total of 34,057 SNPs were used for analysis.
    Analysis:Association analysis was performed using the fixed and random model circulating probability unification (FarmCPU) and mixed linear model.
    Software:Beagle, rMVP
    Notes: 
    Links:Edit

     Reference
    Authors:Gao G, Gao N, Li S, Kuang W, Zhu L, Jiang W, Yu W, Guo J, Li Z, Yang C, Zhao Y
    Affiliation:Guangxi Yangxiang Co., Ltd., Guigang, China
    Title:Genome-Wide Association Study of Meat Quality Traits in a Three-Way Crossbred Commercial Pig Population
    Journal:Frontiers in genetics, 2021, 12: 614087
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #33815461
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  • Cite this Data:

    Animal QTLdb: QTL220137 was published in 2021, and was curated into QTLdb on 2021-04-16. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:220137

     

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