Release 56
(Apr 24, 2025)

QTL 23054 Description:

 Trait Information
Trait name: Meat color Vertebrate Trait Ontology: n/a
Trait details: Minolta L* (loin) Product Trait Ontology: Meat color
Symbol: MCOL Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:41.13 (cM)
QTL Span:41.13-41.13 (cM)
49.0-49.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs45433147
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values8.62E-3
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were commercial market hogs of unknown background.
     Breeds associated:
    n/a
    Design:Loin samples were genotyped for candidate gene SNPs in QTL regions and analyzed for meat quality traits.
    Analysis:Mixed models were used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Rohrer G A, Nonneman D J, Miller R K, Zerby H, Moeller S J
    Affiliation:USDA, ARS, U.S. Meat Animal Research Center, Spur 18D, Clay Center, NE 68933-0166, USA
    Title:Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs
    Journal:Meat science, 2012, 92 (4): 511-8
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22688438
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  • Cite this Data:

    Animal QTLdb: QTL23054 was published in 2012, and was curated into QTLdb on 2013-12-12. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:23054

     

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