| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 145.14 (cM) |
| QTL Span: | 143.13-147.15 (cM)
145.6-150.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs81392476 |
| Peak: | rs81392519 |
| Lower, "Significant": | rs81392678 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.9E-4 | | Dominance effect: | n/a |
| Additive effect: | 0.32 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #23167
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Iberian x Landrace (IBMAP) pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the PorcineSNP60 BeadChip and analyzed for growth and body composition traits. A total of 8417 SNPs were used for the analyses. |
| Analysis: | An animal model was used. |
| Software: | PLINK, QVALUE, Haploview, Qxpak |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fernandez AI, Perez-Montarelo D, Barragan C, Ramayo-Caldas Y, Ibanez-Escriche N, Castello A, Noguera JL, Silio L, Folch JM, Rodriguez MC |
| Affiliation: | Departamento de Mejora Genetica Animal, INIA, Ctra, De la Coruna km, 7, Madrid, 28040, Spain. |
| Title: | Genome-wide linkage analysis of QTL for growth and body composition employing the PorcineSNP60 BeadChip. |
| Journal: | BMC genetics, 2012, 13: 41 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | F3 + BC2 generations |
User inputs on reference #22607048
Add your comments
Note similar findings
Note contradictions
|
