| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | 16.28 (cM) |
| QTL Span: | 16.28-16.28 (cM)
16.9-16.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81381316 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.90E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Italian Large White pigs. |
| Breeds associated:
|
| Design: | Animals with divergent backfat thickness phenotypes were genotyped using the Illumina PorcineSNP60 BeadChip. A total of 49393 SNPs were used for the analysis. |
| Analysis: | The EIGENSTRAT method was used. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fontanesi L, Schiavo G, Galimberti G, Calò DG, Scotti E, Martelli PL, Buttazzoni L, Casadio R, Russo V |
| Affiliation: | Department of Agricultural and Food Science and Technology, University of Bologna, Viale Fanin 46, Bologna 40127, Italy |
| Title: | A genome wide association study for backfat thickness in Italian Large White pigs highlights new regions affecting fat deposition including neuronal genes |
| Journal: | BMC genomics, 2012, 13: 583 |
| Links: |
PubMed | Abstract | List all data
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