| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs343658689 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
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P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SFXN4 (sideroflexin 4) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs were F1 animals from the crossing of 8 Duroc boars and 158 Luchuan sows. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina porcine 50K + SNP iSelect BeadChip, and GWAS was performed for intramuscular fat content. A total of 36,045 SNPs were used for analysis. |
| Analysis: | Linear regression models were used. |
| Software: | MatrixEQTL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Liu Y, Long H, Feng S, Ma T, Wang M, Niu L, Zhang X, Wang L, Lei Y, Chen Y, Wang Q, Xu X |
| Affiliation: | Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, Ministry of Education & College of Animal Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China |
| Title: | Trait correlated expression combined with eQTL and ASE analyses identified novel candidate genes affecting intramuscular fat |
| Journal: | BMC Genomics, 2021, 22(1): 805 |
| Links: |
PubMed | Abstract | List all data
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