| QTL Map Information |
|---|
| Chromosome: | 8 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
79.5-79.5 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
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P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
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| Animals: | Animals were Yorkshire pigs. |
| Breeds associated:
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| Design: | Loci were evaluated for direct genetic effects and social genetic effects on growth and feed intake traits. Animals were genotyped using the Illumina Porcine 50K SNP Chip, with data imputed to whole-genome sequence. |
| Analysis: | Single-locus and haplotype-based GWAS were performed using mixed linear models. |
| Software: | PLINK, SAMtools, GATK, Beagle, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
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| Authors: | Wu P, Wang K, Zhou J, Chen D, Jiang A, Jiang Y, Zhu L, Qiu X, Li X, Tang G |
| Affiliation: | Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, Sichuan Agricultural University, Chengdu, Sichuan, China |
| Title: | A combined GWAS approach reveals key loci for socially-affected traits in Yorkshire pigs |
| Journal: | Communications biology, 2021, 4(1): 891 |
| Links: |
PubMed | Abstract | List all data
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