| QTL Map Information |
|---|
| Chromosome: | 15 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
37.8-37.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs196952262 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.001 | | Dominance effect: | -0.45 |
| Additive effect: | 1.12 |
| Associated Gene: | AGPAT5 (1-acylglycerol-3-phosphate O-acyltransferase 5) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
User inputs on QTL #261627
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc pigs. |
| Breeds associated:
|
| Design: | Pigs were genotyped for a SNP in the AGPAT5 gene and association analysis was performed for intramuscular fat content, fatty acid composition, and production traits. |
| Analysis: | A univariate linear mixed model was used. |
| Software: | JMP PRO 15 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Molinero E, Pena RN, Estany J, Ros-Freixedes R |
| Affiliation: | Department of Animal Science, University of Lleida-Agrotecnio-CERCA Center, Lleida, Catalonia, Spain |
| Title: | Identification of a missense variant in the porcine AGPAT gene family associated with intramuscular fat content through whole-genome sequencing |
| Journal: | Animal genetics, 2022, 53(6):782-793 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #36108237
Add your comments
Note similar findings
Note contradictions
|
QTL261642