| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
14.2-14.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81315056 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 5.1% | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Beijing Black pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP50 BeadChip, and GWAS was performed for intramuscular fat content. A total of 35,422 SNPs were used for analysis. |
| Analysis: | A mixed linear model was used. |
| Software: | TASSEL, SAMtools v1.6.0 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Yang M, Zhang R, Liu X, Shi G, Liu H, Wang L, Hou X, Shi L, Wang L, Zhang L |
| Affiliation: | Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China. |
| Title: | Integrating genome-wide association study with RNA-seq revealed DBI as a good candidate gene for intramuscular fat content in Beijing black pigs. |
| Journal: | Animal Genetics, 2023, 54(1):24-34 |
| Links: |
PubMed | Abstract | List all data
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