| QTL Map Information |
|---|
| Chromosome: | 11 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
19.9-19.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs336483145 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #264168
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were crossbred commercial Duroc x (Landrace x Yorkshire) pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the GeneSeek Porcine 50K SNP BeadChip, and GWAS were performed for internal organ weights. A total of 31,941 SNPs were used for analysis. |
| Analysis: | Linear mixed models were used for single-trait and multi-trait GWAS. |
| Software: | R software, PLINK v1.07, GCTA, GEMMA, Haploview v4.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li X, Wu J, Zhuang Z, Ye Y, Zhou S, Qiu Y, Ruan D, Wang S, Yang J, Wu Z, Cai G, Zheng E |
| Affiliation: | College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou 510642, China |
| Title: | Integrated Single-Trait and Multi-Trait GWASs Reveal the Genetic Architecture of Internal Organ Weight in Pigs |
| Journal: | Animals : an open access journal from MDPI, 2023, 13(5):808 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #36899665
Add your comments
Note similar findings
Note contradictions
|
