Release 56
(Apr 24, 2025)

QTL 28014 Description:

 Trait Information
Trait name: Longissimus muscle area Vertebrate Trait Ontology: Longissimus thoracis muscle area
Reported name: Loin muscle area Product Trait Ontology: n/a
Symbol: LMA Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:16
QTL Peak Location:45.55 (cM)
QTL Span:45.55-45.55 (cM)
38.4-38.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs81297539
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values6.63E-6
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #28014
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were purebred Landrace pigs.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for growth traits.
    Analysis:A mixed model and regression were used.
    Software:PLINK
    Notes: 
    Links:Edit

     Reference
    Authors:Jung E J, Park H B, Lee J B, Yoo C K, Kim B M, Kim H I, Kim B W, Lim H T
    Affiliation:Department of Animal Science, College of Agriculture and Life Sciences, Gyeongsang National University, Jinju, 660-701, Korea; Institute of Agriculture and Life Science, Gyeongsang National University, Jinju, 660-701, Korea
    Title:Genome-wide association analysis identifies quantitative trait loci for growth in a Landrace purebred population
    Journal:Animal genetics, 2014, 45(3): 442-4
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #24506094
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL28014 was published in 2014, and was curated into QTLdb on 2014-06-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:28014

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team