| QTL Map Information |
|---|
| Chromosome: | 16 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
22.4-22.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs338078735 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 7.94% | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NIPBL (NIPBL cohesin loading factor) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Ningxiang indigenous pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the GeneSeek Genomic Profiling (GGP) v2 porcine 50K SNP chip, and GWAS were performed for carcass and meat quality traits. A total of 31,106 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | Beagle 5.4, PLINK v1.9, rMVP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Yin S, Song G, Gao N, Gao H, Zeng Q, Lu P, Zhang Q, Xu K, He J |
| Affiliation: | College of Animal Science and Technology, Hunan Agricultural University, Changsha 410128, China. |
| Title: | Identifying Genetic Architecture of Carcass and Meat Quality Traits in a Ningxiang Indigenous Pig Population. |
| Journal: | Genes, 2023, 14(7):1308 |
| Links: |
PubMed | Abstract | List all data
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