| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
29.2-29.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81444496 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.13% | | FDR | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
User inputs on QTL #286838
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc x (Landrace x Yorkshire) pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the GeneSeek Porcine 50K SNP chip, and GWAS were performed for loin muscle area, loin muscle depth, and backfat thickness. A total of 33,197 SNPs were used for analysis. |
| Analysis: | Single-trait and multi-trait GWAS were performed using univariate and multivariate linear mixed models, respectively. |
| Software: | GEMMA v0.98, PLINK v1.9 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhao X, Qiu Y, Meng F, Zhuang Z, Ruan D, Wu J, Ma F, Zheng E, Cai G, Yang J, Yang M, Wu Z |
| Affiliation: | College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, Guangdong, China |
| Title: | Genome-wide association studies for loin muscle area, loin muscle depth and backfat thickness in DLY pigs |
| Journal: | Animal Genetics, 2024, 55(1):134-139 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #38098441
Add your comments
Note similar findings
Note contradictions
|
