Release 56
(Apr 24, 2025)

QTL 288222 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: live backfat thickness Product Trait Ontology: n/a
Symbol: SUBCFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:8
QTL Peak Location:n/a
QTL Span:n/a
104.8-104.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs330240009
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were American Large White and (Pietrain x Duroc) x (Landrace x Yorkshire) crossbred pigs.
     Breeds associated:
    Design:Animals were genotyped for SNPs in the SYISL promoter region and association analysis was performed for muscle traits.
    Analysis:A least-squares method, applied in the generalized linear mixed model, was used.
    Software:SAS v9.4
    Notes: 
    Links:Edit

     Reference
    Authors:Lv W, Peng Y, Hu J, Zhu M, Mao Y, Wang L, Wang G, Xu Z, Wu W, Zuo B
    Affiliation:Key Laboratory of Swine Genetics and Breeding of the Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan, China
    Title:Functional SNPs in SYISL promoter significantly affect muscle fiber density and muscle traits in pigs
    Journal:Animal Genetics, 2024, 55(1): 66-78
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #37881102
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  • Cite this Data:

    Animal QTLdb: QTL288222 was published in 2024, and was curated into QTLdb on 2024-03-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:288222

     

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