| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 42.10 (cM) |
| QTL Span: | 42.10-42.10 (cM)
30.1-30.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80884339 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.3E-8 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a Large White x Minzhu resource population. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for body size traits. A total of 48,238 SNPs were used for analysis. |
| Analysis: | Genomewide rapid association using mixed model and regression with genomic control (GRAMMAR-GC) was employed. |
| Software: | GenABEL in R, SAS, DMU, Haploview, Haplo.Stats in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wang L, Zhang L, Yan H, Liu X, Li N, Liang J, Pu L, Zhang Y, Shi H, Zhao K, Wang L |
| Affiliation: | Key Laboratory of Farm Animal Genetic Resources and Germplasm Innovation of Ministry of Agriculture of China, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China |
| Title: | Genome-wide association studies identify the loci for 5 exterior traits in a Large White × Minzhu pig population |
| Journal: | PloS one, 2014, 9(8): e103766 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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