| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs340001939 |
| Peak: | |
| Lower, "Significant": | rs321877574 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Sujiang pigs. |
| Breeds associated:
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| Design: | Pigs were genotyped using the GeneSeek GGP Porcine 80K SNP BeadChip, with data imputed to whole-genome sequence, and GWAS were performed for growth and fatness traits. A total of 4,155,006 SNPs were used for analysis. |
| Analysis: | Linear mixed models were used. |
| Software: | SAMtools v1.9, PLINK v1.9, Beagle, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xu P, Li D, Wu Z, Ni L, Liu J, Tang Y, Yu T, Ren J, Zhao X, Huang M |
| Affiliation: | School of Animal Science and Technology, Jiangsu Agri-animal Husbandry Vocational College, Taizhou, PR China |
| Title: | An imputation-based genome-wide association study for growth and fatness traits in Sujiang pigs |
| Journal: | Animal : an international journal of animal bioscience, 2022, 16(8): 100591 |
| Links: |
PubMed | Abstract | List all data
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