QTL Map Information |
Chromosome: | 1 |
QTL Peak Location: | 56.56 (cM) |
QTL Span: | 56.56-56.56 (cM) 106.7-106.7 (Mbp) |
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Upper, "Suggestive": | n/a |
Upper, "Significant": | n/a |
Peak: | rs81355510 |
Lower, "Significant": | n/a |
Lower, "Suggestive": | n/a |
Marker type: | SNP |
Analysis type: | Association |
Model tested: | Mendelian |
Test base: | Experiment-wise |
Threshold significance level: | Significant |
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P_values | 0.03 | Dominance effect: | n/a |
Additive effect: | n/a |
Associated Gene: | n/a |
Cis/Trans acting type: |  |
Links:
NCBI GeneDB | Edit |
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Extended information: |
(none) |
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QTL Experiment in Brief |
Animals: | Animals were from Landrace and Large White commercial lines. |
Breeds associated:
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Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for sperm motility. A total of 42,551 SNPs (Landrace) or 40,890 SNPs (Large White) were used for analysis. |
Analysis: | A weighted linear mixed model was used. |
Software: | GenABEL, R software, Haploview |
Notes: | |
Links: | Edit |
Reference |
Authors: | Diniz D B, Lopes M S, Broekhuijse M L W J, Lopes P S, Harlizius B, Guimarães S E F, Duijvesteijn N, Knol E F, Silva F F |
Affiliation: | Universidade Federal de Viçosa, Animal Science Department, 36570-000 Viçosa, Minas Gerais, Brazil |
Title: | A genome-wide association study reveals a novel candidate gene for sperm motility in pigs |
Journal: | Animal reproduction science, 2014, 151(3-4): 201-7 |
Links: |
PubMed | Abstract | List all data
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