| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 57.60 (cM) |
| QTL Span: | 57.60-57.60 (cM)
108.3-108.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81355558 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.04 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from Landrace and Large White commercial lines. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for sperm motility. A total of 42,551 SNPs (Landrace) or 40,890 SNPs (Large White) were used for analysis. |
| Analysis: | A weighted linear mixed model was used. |
| Software: | GenABEL, R software, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Diniz D B, Lopes M S, Broekhuijse M L W J, Lopes P S, Harlizius B, Guimarães S E F, Duijvesteijn N, Knol E F, Silva F F |
| Affiliation: | Universidade Federal de Viçosa, Animal Science Department, 36570-000 Viçosa, Minas Gerais, Brazil |
| Title: | A genome-wide association study reveals a novel candidate gene for sperm motility in pigs |
| Journal: | Animal reproduction science, 2014, 151(3-4): 201-7 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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