Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 38088 Description:

 Trait Information
Trait name: Meat color Vertebrate Trait Ontology: n/a
Trait details: meat color lightness (L*) Product Trait Ontology: Meat color
Symbol: MCOL Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:5
QTL Peak Location:87.1 (cM)
QTL Span:8.4-125 (cM)
3.7-91.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW413
Peak:
Lower, "Significant":SW1383
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat5.7
VARIANCE1.2
P_values<0.05
Dominance effect:n/a
Additive effect:1.153
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a cross between Landrace and Korean native pigs.
     Breeds associated:
    Design:Animals were genotyped for 173 microsatellite markers and analyzed for meat quality and carcass traits.
    Analysis:An interval mapping model based on the least-squares regression method was used.
    Software:CRIMAP, GridQTL
    Notes: 
    Links:Edit

     Reference
    Authors:Cho IC, Yoo CK, Lee JB, Jung EJ, Han SH, Lee SS, Ko MS, Lim HT, Park HB
    Affiliation:Department of Animal Science and Biotechnology (BK21 plus program), College of Agriculture and Life Sciences, Chungnam National University, Daejeon, 305-764, Korea
    Title:Genome-wide QTL analysis of meat quality-related traits in a large F2 intercross between Landrace and Korean native pigs
    Journal:Genetics, Selection, Evolution : GSE, 2015, 47(1): 7
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #25888076
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  • Cite this Data:

    Animal QTLdb: QTL38088 was published in 2015, and was curated into QTLdb on 2015-05-27. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:38088

     

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