| QTL Map Information |
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| Chromosome: | 7 |
| QTL Peak Location: | 139.86 (cM) |
| QTL Span: | 139.86-139.86 (cM)
109.0-109.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80809693 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 9.39E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
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| Animals: | Animals were Chinese Erhualian and Western Duroc x (Landrace x Yorkshire) pigs. A meta-analysis was performed using data from these two populations as well as White Duroc x Erhualian F2 and Sutai pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for meat quality traits. A final set of 35,985 SNPs for Erhualian and 56,216 SNPs for DLY pigs were used for analysis. Meta-analysis used 29,516 SNPs. |
| Analysis: | A generalized linear mixed model was used. |
| Software: | GenABEL in R, METAL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Liu X, Xiong X, Yang J, Zhou L, Yang B, Ai H, Ma H, Xie X, Huang Y, Fang S, Xiao S, Ren J, Ma J, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, 330045, China |
| Title: | Genome-wide association analyses for meat quality traits in Chinese Erhualian pigs and a Western Duroc x (Landrace x Yorkshire) commercial population |
| Journal: | Genetics, Selection, Evolution : GSE, 2015, 47: 44 |
| Links: |
PubMed | Abstract | List all data
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