| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 87.95 (cM) |
| QTL Span: | 87.95-87.95 (cM)
164.7-164.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80956812 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
Bayes_value | 30.1 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #64726
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | 2,351 genotyped sows and boars with deregressed breeding values for litter size and 2,067 in the set for residual variance of litter size. |
| Breeds associated:
|
| Design: | 264,419 litter size records (total number born, TNB) from 69,549 Large White sows used to obtain deregressed breeding values for litter size and residual variance of litter size. Deregressed breeding values were later used in GWAS. |
| Analysis: | Bayesian Variable Selection method |
| Software: | bayz |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | E Sell-Kubiak, N Duijvesteijn, M S Lopes, L L G Janss, E F Knol, P Bijma, H A Mulder |
| Affiliation: | Wageningen University |
| Title: | Genome-wide association study reveals novel loci for litter size and its variability in a Large White pig population |
| Journal: | BMC Genomics, 2015, 16 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #26652161
Add your comments
Note similar findings
Note contradictions
|
