| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 53.23 (cM) |
| QTL Span: | 53.23-53.23 (cM)
54.3-54.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs319215203 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from three different pig populations: Duroc x Pietrain F2, a population originating from the mating of Yorkshire-Landrace females with Duroc or Landrace sires, and a commercial population of unspecified breed composition. |
| Breeds associated:
n/a
|
| Design: | A meta-analysis was performed on GWAS data from the three independent populations. Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for meat quality traits. |
| Analysis: | Population z-scores obtained from multiple independent GWA studies were combined into a single z-score. |
| Software: | BEAGLE |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bernal Rubio YL, Gualdrón Duarte JL, Bates RO, Ernst CW, Nonneman D, Rohrer GA, King DA, Shackelford SD, Wheeler TL, Cantet RJ, Steibel JP |
| Affiliation: | Departamento de Produccion Animal, Facultad de Agronomia, UBA, Buenos Aires, Argentina; Department of Fisheries and Wildlife, Michigan State University, East Lansing 48824, USA |
| Title: | Implementing meta-analysis from genome-wide association studies for pork quality traits |
| Journal: | Journal of animal science, 2015, 93(12): 5607-17 |
| Links: |
PubMed | Abstract | List all data
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