| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 43.87 (cM) |
| QTL Span: | 43.87-43.87 (cM)
31.2-31.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80912557 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | 0.04 |
| Additive effect: | 0.16 |
| Associated Gene: | PPARD (peroxisome proliferator-activated receptor delta) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #71077
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Large White x Meishan F2, American Large White, and French Large White pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped for two SNPs in the 5' regulatory region of PPARD and analyzed for carcass and fat deposition traits. |
| Analysis: | The general linear model procedure was used. |
| Software: | Haploview, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang Y, Gao T, Hu S, Lin B, Yan D, Xu Z, Zhang Z, Mao Y, Mao H, Wang L, Wang G, Xiong Y, Zuo B |
| Affiliation: | Key Laboratory of Swine Genetics and Breeding, Ministry of Agriculture and Key Lab of Agricultural Animal Genetics and Breeding, Ministry of Education, College of Animal Science and Veterinary Medicine, Huazhong Agricultural Universi |
| Title: | The Functional SNPs in the 5' Regulatory Region of the Porcine PPARD Gene Have Significant Association with Fat Deposition Traits |
| Journal: | PloS one, 2015, 10(11): e0143734 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #26599230
Add your comments
Note similar findings
Note contradictions
|
