Fluorescent Primers

Table 1-1.

	Set I - VIII Fluorescent Primer Multiplexing Group Information (Tested)
NOTE:	All markers in this table are arranged by multiplex groups
	1.	Markers with the same group number can be multiplexed.
	2.	Those marked with "-" don't have multiplex group information available.

Chromosomal Locations	Marker Name¹	Fluorescent Dye²	PCR Annealing Temperature	Multiplex Group	Primer Set³

Chr. 17	SW2441	Fam	58	1	Set IV
Chr. X	SW2456	Hex	58	1	Set III
Chr. 5	SW1468	Tet	55	2	Set IV
Chr. 2	SW1879	Hex	55	2	Set VII
Chr. 15	SW1983	Hex	55	3	Set IV
Chr. 12	SW2494	Tet	55	3	Set VII
Chr. 10	SW497	Fam	58	4	Set IV
Chr. 12	S0090	Fam	55	4	Set I/II
Chr. 14	SW55	Fam	58	4	Set VII
Chr. 10	SW830	Fam	55	5	Set I/II
Chr. 9	SW21	Hex	60	6	Set III
Chr. 15	SW964	Tet	58	7	Set IV
Chr. 8	SW763	Hex	62	8	Set IV
Chr. X	S0218	Tet	55	8	Set I/II
Chr. 1	SW974	Fam	58	9	Set IV
Chr. 15	SW1683	Tet	58	9	Set IV
Chr. 2	SW2192	Hex	65	10	Set IV
Chr. 3	SW2408	Fam	58	11	Set IV
Chr. 4	S0301	Fam	55	11	Set I/II
Chr. 13	SW935	Tet	58	12	Set IV
Chr. 16	S0111	Hex	58	12	Set IV
Chr. 2	S0036	Hex	58	13	Set III
Chr. 14	SWC27	Fam	58	15	Set IV
Chr. 7	S0025	Fam	55	16	Set I/II
Chr. X	SW949	Tet	58	17	Set III
Chr. 12	SW957	Hex	58	18	Set III
Chr.18	SW1682	Tet	58	20	Set VIII
Chr. 5	SW995	Fam	58	21	Set III
Chr. 13	S0215	Hex	55	22	Set I/II
Chr. 3	S0352	Fam	58	22	Set VII
Chr. 7	SW1369	Hex	60	23	Set IV
Chr. 11	S0071	Hex	55	23	Set I/II
Chr. 17	SW1031	Fam	58	23	Set IV
Chr. 7	SW1354	Tet	58	24	Set IV
Chr. 7	S0101	Hex	60	25	Set I/II
Chr. 12	SW2490	Hex	58	25	Set IV
Chr. 1	SW1301	Fam	58	26	Set IV
Chr. X	SW980	Fam	55	27	Set I/II
Chr. 1	SW1824	Tet	60	28	Set IV
Chr. 10	SWC19	Hex	58	28	Set IV
Chr. 6	SW1881	Fam	58	29	Set IV
Chr. 17	SW335	Tet	55	29	Set IV
Chr. 8	SW1029	Hex	60	30	Set IV
Chr. 13	SW864	Fam	60	30	Set IV
Chr. 14	SW1125	Tet	60	30	Set IV
Chr. 2	SWR2157	Hex	60	31	Set IV
Chr. 4	S0214	Tet	55	32	Set I/II
Chr. 6	S0087	Tet	58	32	Set I/II
Chr. 4	SW2404	Hex	62	33	Set III
Chr. X	SW2588	Fam	62	33	Set IV
Chr. 14	SW2612	Tet	60	34	Set IV
Chr. 1	SW1515	Hex	60	34	Set V
Chr. 8	S0086	Fam	55	35	Set I/II
Chr. 11	SW703	Hex	58	36	Set IV
Chr. 5	SW2425	Tet	58	36	Set V
Chr. 12	SW874	Hex	55	37	Set I/II
Chr. 2	SW240	Tet	55	40	Set I/II
Chr. 11	S0009	Fam	55	40	Set I/II
Chr. 16	SW2517	Fam	58	40	Set IV
Chr. 2	SW2623	Tet	60	41	Set IV
Chr. 3	SW902	Fam	55	41	Set I/II
Chr. 9	SW983	Hex	60	41	Set III
Chr. 6	SW2406	Tet	58	42	Set III
Chr. X	SW2470	Hex	58	42	Set IV
Chr. 5	SW1200	Fam	60	43	Set IV
Chr. 5	SW967	Hex	58	43	Set I/II
Chr. 2	SW1026	Tet	60	44	Set IV
Chr. 5	SW378	Tet	60	45	Set III
Chr. X	SW2534	Hex	60	45	Set IV
Chr. 1	S0112	Tet	55	46	Set I/II
Chr. 9	SW2401	Fam	58	46	Set IV
Chr. 10	SW920	Fam	55	46	Set I/II
Chr. 7	SW764	Tet	60	47	Set III
Chr. 4	SW856	Tet	62	48	Set IV
Chr. 3	SW2618	Hex	58	49	Set IV
Chr. 13	SW1056	Tet	62	50	Set I/II
Chr. 17	SW2431	Fam	60	51	Set IV
Chr. 6	SW322	Tet	62	52	Set III
Chr. 15	SW1119	Hex	60	52	Set I/II
Chr. 6	SW122	Fam	55	53	Set I/II
Chr. 6	SW2419	Tet	58	54	Set III
Chr. 9	SW911	Fam	55	54	Set I/II
Chr. 6	S0121	Hex	55	55	Set VIII
Chr. 8	SW61	Hex	55	65	Set I/II
Chr. 1	SW64	Tet	58	-	Set I/II
Chr. 1	SW1851	Tet	62	-	Set III
Chr. 1	CGA	Hex	55	-	Set I/II
Chr. 1	SW781	Hex	55	-	Set I/II
Chr. 1	SW2185	Fam	55	-	Set IV
Chr. 1	S0313	Hex	55	-	Set I/II
Chr. 1	S0113	Tet	60	-	Set I/II
Chr. 1	S0155	Fam	55	-	Set I/II
Chr. 1	S0316	Fam	62	-	Set V
Chr. 1	S0320	Tet	58	-	Set V
Chr. 1	S0056	Hex	58	-	Set V
Chr. 2	SW2443	Hex	62	-	Set III
Chr. 2	SW256	Fam	62	-	Set I/II
Chr. 2	SWR783	Tet	62	-	Set III
Chr. 2	S0141	Hex	55	-	Set I/II
Chr. 2	SW1201	Tet	58	-	Set IV
Chr. 2	SW395	Fam	55	-	Set I/II
Chr. 2	S0010	Hex	55	-	Set I/II
Chr. 2	S0226	Fam	55	-	Set I/II
Chr. 2	SW2514	Hex	62	-	Set III
Chr. 2	S0378	Hex	55	-	Set I/II
Chr. 2	SW1564	Fam	58	-	Set V
Chr. 3	SW274	Tet	60	-	Set IV
Chr. 3	SW72	Fam	58	-	Set I/II
Chr. 3	SWR1637	Hex	65	-	Set IV
Chr. 3	S0206	Fam	60	-	Set I/II
Chr. 3	S0164	Tet	55	-	Set I/II
Chr. 3	S0216	Tet	55	-	Set I/II
Chr. 3	S0002	Hex	62	-	Set I/II
Chr. 3	SW349	Hex	62	-	Set IV
Chr. 3	S0165	Fam	62	-	Set III
Chr. 3	SW2570	Tet	58	-	Set V
Chr. 4	S0227	Hex	55	-	Set I/II
Chr. 4	S0001	Fam	55	-	Set I/II
Chr. 4	SW35	Fam	58	-	Set III
Chr. 4	SW839	Fam	62	-	Set III
Chr. 4	S0217	Tet	62	-	Set III
Chr. 4	S0073	Fam	55	-	Set III
Chr. 4	SW445	Tet	58	-	Set III
Chr. 4	S0097	Tet	58	-	Set I/II
Chr. 4	S0011	Hex	55	-	Set V
Chr. 5	SW1482	Tet	55	-	Set III
Chr. 5	SWR453	Hex	55	-	Set I/II
Chr. 5	SW2	Fam	55	-	Set III
Chr. 5	SW1134	Tet	60	-	Set III
Chr. 5	S0005	Tet	58	-	Set I/II
Chr. 5	IGF1	Fam	58	-	Set I/II
Chr. 6	S0035	Fam	65	-	Set III
Chr. 6	SW1057	Hex	58	-	Set I/II
Chr. 6	S0220	Fam	60	-	Set I/II
Chr. 6	SW316	Hex	58	-	Set III
Chr. 6	S0003	Hex	55	-	Set I/II
Chr. 6	S0228	Tet	55	-	Set I/II
Chr. 6	SW1353	Hex	58	-	Set V
Chr. 6	S0099	Fam	68	-	Set V
Chr. 7	SWR1343	Fam	60	-	Set IV
Chr. 7	S0064	Fam	55	-	Set I/II
Chr. 7	SW472	Tet	58	-	Set III
Chr. 7	S0102	Fam	55	-	Set I/II
Chr. 7	SW175	Hex	55	-	Set I/II
Chr. 7	S0066	Tet	55	-	Set I/II
Chr. 7	SW352	Tet	55	-	Set III
Chr. 7	SW632	Tet	58	-	Set I/II
Chr. 7	S0212	Fam	55	-	Set III
Chr. 8	SW2410	Hex	55	-	Set III
Chr. 8	SW905	Fam	55	-	Set I/II
Chr. 8	SW1702	Tet	60	-	Set IV
Chr. 8	S0017	Hex	55	-	Set I/II
Chr. 8	S0069	Hex	62	-	Set IV
Chr. 8	S0225	Hex	55	-	Set I/II
Chr. 8	OPN (SPP1)	Hex	60	-	Set I/II
Chr. 8	S0178	Tet	58	-	Set I/II
Chr. 8	S0098	Tet	65	-	Set V
Chr. 9	SW940	Hex	58	-	Set III
Chr. 9	SW539	Fam	55	-	Set I/II
Chr. 9	S0019	Hex	55	-	Set III
Chr. 9	S0295	Fam	58	-	Set III
Chr. 9	SW174	Tet	55	-	Set I/II
Chr. 9	SW749	Tet	58	-	Set III
Chr. 9	S0024	Hex	55	-	Set V
Chr. 9	W54	Fam	63	-	Set V
Chr. 10	S0038	Hex	62	-	Set III
Chr. 10	SW249	Hex	55	-	Set I/II
Chr. 10	SW173	Tet	55	-	Set I/II
Chr. 10	S0070	Hex	55	-	Set I/II
Chr. 10	SW1041	Hex	58	-	Set III
Chr. 10	SW951	Hex	58	-	Set I/II
Chr. 10	SW2067	Hex	55	-	Set III
Chr. 10	SW1626	Tet	62	-	Set V
Chr. 10	SW1894	Hex	58	-	Set V
Chr. 11	S0385	Hex	55	-	Set III
Chr. 11	SW2008	Hex	60	-	Set III
Chr. 11	SW435	Tet	55	-	Set I/II
Chr. 11	S0230	Fam	55	-	Set I/II
Chr. 11	S0386	Tet	48	-	Set I/II
Chr. 11	SW2413	Fam	62	-	Set IV
Chr. 11	S0182	Fam	55	-	Set V
Chr. 11	SW1377	Tet	60	-	Set V
Chr. 12	S0143	Tet	55	-	Set I/II
Chr. 12	S0229	Fam	58	-	Set IV
Chr. 12	S0106	Hex	55	-	Set I/II
Chr. 12	SW605	Fam	55	-	Set I/II
Chr. 12	SWR1021	Hex	60	-	Set IV
Chr. 12	S0083	Hex	58	-	Set V
Chr. 13	S0219	Hex	55	-	Set I/II
Chr. 13	SWR1941	Tet	62	-	Set IV
Chr. 13	SWr1008	Hex	62	-	Set I/II
Chr. 13	S0068	Tet	55	-	Set I/II
Chr. 13	SW225	Tet	55	-	Set III
Chr. 13	SW398	Hex	55	-	Set I/II
Chr. 13	SW769	Fam	55	-	Set I/II
Chr. 13	S0289	Fam	62	-	Set V
Chr. 13	SW344	Tet	55	-	Set V
Chr. 14	SW857	Hex	55	-	Set I/II
Chr. 14	SW295	Tet	55	-	Set I/II
Chr. 14	SW210	Fam	55	-	Set I/II
Chr. 14	S0007	Hex	55	-	Set I/II
Chr. 14	SW761	Tet	60	-	Set III
Chr. 14	SW1557	Tet	58	-	Set III
Chr. 14	SW2515	Fam	55	-	Set I/II
Chr. 14	SW77	Hex	62	-	Set V
Chr. 15	S0355	Fam	55	-	Set I/II
Chr. 15	SW1204	Hex	58	-	Set III
Chr. 15	S0004	Hex	55	-	Set III
Chr. 15	SW1111	Tet	55	-	Set I/II
Chr. 15	S0088	Tet	58	-	Set IV
Chr. 15	SW936	Fam	58	-	Set I/II
Chr. 15	SW906	Tet	55	-	Set I/II
Chr. 16	SW742	Hex	60	-	Set III
Chr. 16	S0006	Tet	58	-	Set III
Chr. 16	S0298	Tet	60	-	Set III
Chr. 16	S0026	Hex	55	-	Set I/II
Chr. 16	S0061	Hex	55	-	Set I/II
Chr. 17	SWr1004	Fam	60	-	Set I/II
Chr. 17	SW24	Tet	58	-	Set I/II
Chr. 17	S0296	Fam	55	-	Set I/II
Chr. 17	SW840	Fam	53	-	Set I/II
Chr. 17	S0014	Tet	60	-	Set III
Chr. 18	SW1023	Fam	55	-	Set I/II
Chr. 18	SW787	Fam	55	-	Set I/II
Chr. 18	S0120	Fam	58	-	Set III
Chr. 18	SWR414	Tet	55	-	Set IV
Chr. X	SW2476	Hex	62	-	Set III
Chr. X	SW707	Hex	55	-	Set I/II
Chr. X	SW1943	Tet	62	-	Set V
Chr. X	SWR1861	Hex	50	-	Set V

Acknowledgement:

The suggested multiplex groups are based on information kindly provided by Rohrer et al. "Mapping 28 erythrocyte antigen, plasma protein and enzyme polymorphisms using an efficient genomic scan of the porcine genome" (Animal Genetics, 28:323-330).