Release 56
(Apr 24, 2025)

QTL 302247 Description:

 Trait Information
Trait name: Offspring number Vertebrate Trait Ontology: Offspring quantity
Trait details: litter size Product Trait Ontology: n/a
Symbol: OFSPN Clinical Measurement Ontology: Number of offspring
 QTL Map Information
Chromosome:11
QTL Peak Location:n/a
QTL Span:n/a
11.1-11.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs422171384
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:-
Test base:-
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:BRIP1 (BRCA1 interacting helicase 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Dexin mutton and fine-wool sheep.
     Breeds associated:
    n/a
    Design:Animals were subjected to whole-genome sequencing and association analysis was performed for genes identified as candidate genes for litter size.
    Analysis:The logistic regression model was used.
    Software:SAMtools v1.9, PLINK v1.9, VCFtools v0.1.14, SPSS 20.0, SAS v9.2
    Notes: 
    Links:Edit

     Reference
    Authors:Zhu M, Li P, Wu W, Zheng W, Huang J, Tulafu H, Lin C, Tao W, Aladaer Q
    Affiliation:College of Animal Science, Xinjiang Agricultural University, Urumqi, China
    Title:The genetic characterization of germplasm and identification of the litter size trait associated candidate genes in Dexin mutton and fine-wool sheep
    Journal:Frontiers in Genetics, 2024, 15:1457634
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #39211736
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  • Cite this Data:

    Animal QTLdb: QTL302247 was published in 2024, and was curated into QTLdb on 2024-10-29. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:302247

     

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