Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 1246 Description:

 Trait Information
Trait name: Muscle pH Vertebrate Trait Ontology: Muscle pH regulation trait
Trait details: pH 24 hr post-mortem in longissimus dorsi Product Trait Ontology: Meat pH
Symbol: MPH Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:6
QTL Peak Location:111 (cM)
QTL Span:105-115 (cM)
77.8-89.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":A1BG
Peak:
Lower, "Significant":EAH
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
VARIANCE30.5
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Purebred pigs of 3 genetically diverse founder groups Meishan, Pietrain, and European Wild Boar were used to create 3 generation inter-cross resource families.
     Breeds associated:
    n/a
    Design:Animals in the resource family population were genotyped for segregating markers and recorded for their production traits. Data were analyze for existance and locations of QTL.
    Analysis:Segragating markers and traits in the F2 of resource families are analyzed with a least-squares method. Critical threshold values of the test statistic were derived by a permutation test.
    Software:CRIMAP v.2.4; Haley's QTL tool
    Notes: 
    Links:Edit

     Reference
    Authors:H. Geldermann, E. Muller, G. Moser, G. Reiner, H. Bartenschlager, S. Cepica, A. Stratil, J. Kuryl, C. Moran, R. Davoli and C. Brunsch
    Affiliation:Department of Animal Breeding and Biotechnology, University of Hohenheim, Stuttgart, Germany
    Title:Genome-wide linkage and QTL mapping in porcine F2 families
    Journal:J Anim Breed Genet, 2003, 120:363-­393
    Links:  No PubMed entry  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #ISU0006
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  • Cite this Data:

    Animal QTLdb: QTL1246 was published in 2003, and was curated into QTLdb on 2006-04-20. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:1246

     

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