A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LOC654323 location ⇒ 17:35827109-35827510   FP236274,CH242-464F3,17:35815183-35832078
(Clone quality: bE464F3 on chr=17; Num_of_Contigs=5; )
LOC728320 location ⇒ 13:61542538-61542467   CU633685,CH242-265M20,13:61378623-61549248
(Clone quality: bE265M20 on chr=13; Num_of_Contigs=2; )
LOC728320 location ⇒ 13:61545372-61545281   CU633685,CH242-265M20,13:61378623-61549248
(Clone quality: bE265M20 on chr=13; Num_of_Contigs=2; )
LOC730415 location ⇒ 7:29139766-29139495 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
LOC730415 location ⇒ 7:29154056-29153947 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
LOC730415 location ⇒ 7:29155356-29155085 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
LOC730415 location ⇒ 7:29173234-29173125 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
LONP1   ENSSSCG00000013526 2:49391167-49411637   FP089464,CH242-231P22,2:49368415-49462890
(Clone quality: bE231P22 on chr=2; Num_of_Contigs=4; )
LONP2   ENSSSCG00000002843 6:24732980-24817621    
LONRF1   ENSSSCG00000006968 17:523063-555224    
LONRF2   ENSSSCG00000008176 3:49676255-49704839    
LONRF3   ENSSSCG00000012631 X:97017162-97052288    
LOR ENSSSCG00000016613 18:23149414-23194976    
LOX location ⇒ 2:113572302-113572183   CU928298,CH242-225M8,2:113561484-113585663
(Clone quality: bE225M8 on chr=2; Num_of_Contigs=4; )
LOX location ⇒ 2:113576366-113576209   CU928298,CH242-225M8,2:113561484-113585663
(Clone quality: bE225M8 on chr=2; Num_of_Contigs=4; )
LOX location ⇒ 2:113578223-113578090   CU928298,CH242-225M8,2:113561484-113585663
(Clone quality: bE225M8 on chr=2; Num_of_Contigs=4; )
LOX location ⇒ 2:113581065-113580052   CU928298,CH242-225M8,2:113561484-113585663
(Clone quality: bE225M8 on chr=2; Num_of_Contigs=4; )
LOXHD1   ENSSSCG00000004503 1:100202986-100300411    
LOXL1 ENSSSCG00000001914 7:64908077-64931484   CU468908,CH242-516A11,7:64903077-65019161
(Clone quality: bE516A11 on chr=7; Num_of_Contigs=3; )
LOXL3   ENSSSCG00000008266 3:62888756-62906904    
LOXL4   ENSSSCG00000010532 14:114273319-114294014   CU041356,CH242-40F23,14:114257236-114417849
(Clone quality: bE40F23 on chr=14; Num_of_Contigs=2; )
LPAR1   ENSSSCG00000005457 1:264712442-264774056    
LPAR2   ENSSSCG00000013932 2:63389115-63391490   FP017144,CH242-263C22,2:63368725-63394740
(Clone quality: bE263C22 on chr=2; Num_of_Contigs=8; )
LPAR3   ENSSSCG00000003756 6:88923557-88975397   CU972437,CH242-431N22,6:88820116-89017733
(Clone quality: bE431N22 on chr=6; Num_of_Contigs=1; )
LPAR4   ENSSSCG00000012445 X:62458019-62459131 CU407122,CH242-52A15,X:62293673-62465423
(Clone quality: bE52A15 on chr=X; Num_of_Contigs=1; ) 		 
LPAR5   ENSSSCG00000000699 5:60120571-60123321    
LPAR6   ENSSSCG00000009402 11:18671524-18673706   CU406986,CH242-455N14,11:18618991-18709564
(Clone quality: bE455N14 on chr=11; Num_of_Contigs=2; )
LPCAT1   ENSSSCG00000017116 16:76671366-76709043   CU914477,CH242-78M22,16:76633972-76716864
(Clone quality: bE78M22 on chr=16; Num_of_Contigs=11; )
LPCAT2   ENSSSCG00000002828 6:20762664-20818599   CU442722,CH242-97L16,6:20726219-20900080
(Clone quality: bE97L16 on chr=6; Num_of_Contigs=1; )
LPCAT3   ENSSSCG00000001078 7:16015069-16280933    
LPCAT4 ENSSSCG00000002242 7:87958118-87965934   CU024883,CH242-130K2,7:87939435-87966978
(Clone quality: bE130K2 on chr=7; Num_of_Contigs=5; )
LPGAT1   ENSSSCG00000015603 9:123854100-123967625    
LPHN1 ENSSSCG00000013773 2:57123614-57142253   FP086609,CH242-184K22,2:57123382-57144566
(Clone quality: bE184K22 on chr=2; Num_of_Contigs=6; )
LPHN1 location ⇒ 2:57142008-57142253   FP086609,CH242-184K22,2:57123382-57144566
(Clone quality: bE184K22 on chr=2; Num_of_Contigs=6; )
LPHN2 ENSSSCG00000003761 6:91254715-91337399   CU929625,CH242-328N4,6:91251392-91345967
(Clone quality: bE328N4 on chr=6; Num_of_Contigs=4; )
LPHN2 location ⇒ 6:91255471-91255213   CU929625,CH242-328N4,6:91251392-91345967
(Clone quality: bE328N4 on chr=6; Num_of_Contigs=4; )
LPHN2 location ⇒ 6:91260772-91260673   CU929625,CH242-328N4,6:91251392-91345967
(Clone quality: bE328N4 on chr=6; Num_of_Contigs=4; )
LPHN2 location ⇒ 6:91261602-91261474   CU929625,CH242-328N4,6:91251392-91345967
(Clone quality: bE328N4 on chr=6; Num_of_Contigs=4; )
LPHN2 location ⇒ 6:91264467-91264296   CU929625,CH242-328N4,6:91251392-91345967
(Clone quality: bE328N4 on chr=6; Num_of_Contigs=4; )
LPHN3 ENSSSCG00000008916 8:52159173-52342740    
LPHN3 location ⇒ 8:52359693-52359485   CU571365,CH242-429E12,8:52359415-52362758
(Clone quality: bE429E12 on chr=8; Num_of_Contigs=11; )
LPHN3 location ⇒ 8:52405780-52405609   CU571365,CH242-429E12,8:52401763-52408606
(Clone quality: bE429E12 on chr=8; Num_of_Contigs=11; )
LPHN3 location ⇒ 8:52410431-52410304   CU571365,CH242-429E12,8:52408707-52411012
(Clone quality: bE429E12 on chr=8; Num_of_Contigs=11; )
LPHN3 location ⇒ 8:52602489-52602318   CU856575,CH242-206G11,8:52560354-52623595
(Clone quality: bE206G11 on chr=8; Num_of_Contigs=2; )
LPIN1   ENSSSCG00000008624 3:115755112-115840186    
LPIN2 ENSSSCG00000003695 6:71071291-71098689    
LPIN2 location ⇒ 6:71071733-71071452   FP102850,CH242-229P20,6:71061238-71081695
(Clone quality: bE229P20 on chr=6; Num_of_Contigs=5; )
LPIN2 location ⇒ 6:71072102-71071996   FP102850,CH242-229P20,6:71061238-71081695
(Clone quality: bE229P20 on chr=6; Num_of_Contigs=5; )
LPIN2 location ⇒ 6:71072745-71072628   FP102850,CH242-229P20,6:71061238-71081695
(Clone quality: bE229P20 on chr=6; Num_of_Contigs=5; )
LPIN2 location ⇒ 6:71073187-71073034   FP102850,CH242-229P20,6:71061238-71081695
(Clone quality: bE229P20 on chr=6; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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