A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LPIN3   ENSSSCG00000007359 17:46095557-46112604   FP236782,CH242-252F19,17:46087164-46114893
(Clone quality: bE252F19 on chr=17; Num_of_Contigs=9; )
LPL ENSSSCG00000009600 14:3826422-3856471   CU498830,CH242-270L16,14:3808126-3881889
(Clone quality: bE270L16 on chr=14; Num_of_Contigs=5; )
LPL location ⇒ 14:1559269-1559184   CT954279,CH242-521H19,14:1505984-1634034
(Clone quality: bE521H19 on chr=14; Num_of_Contigs=4; )
LPL location ⇒ 14:2022264-2022381   CU582975,CH242-336D20,14:2017853-2033907
(Clone quality: bE336D20 on chr=14; Num_of_Contigs=6; )
LPL location ⇒ 14:2351495-2351411   CT990612,CH242-266O18,14:2342891-2369930
(Clone quality: bE266O18 on chr=14; Num_of_Contigs=7; )
LPL location ⇒ 14:823680-823563   CT841544,CH242-261L4,14:784668-842076
(Clone quality: bE261L4 on chr=14; Num_of_Contigs=6; )
LPO   ENSSSCG00000017636 12:32515991-32574585    
LPP location ⇒ 12:5292049-5292150 CU694775,CH242-198F8,12:5226179-5409022
(Clone quality: bE198F8 on chr=12; Num_of_Contigs=3; ) 		 
LPP location ⇒ 12:5918929-5918812   CU466404,CH242-455N10,12:5908465-5990190
(Clone quality: bE455N10 on chr=12; Num_of_Contigs=7; )
LPP location ⇒ 12:8855713-8855608   FP016215,CH242-105N3,12:8729704-8880252
(Clone quality: bE105N3 on chr=12; Num_of_Contigs=1; )
LPP location ⇒ 12:8976512-8976633   CU928797,CH242-478I10,12:8895686-8983549
(Clone quality: bE478I10 on chr=12; Num_of_Contigs=4; )
LPXN location ⇒ 2:10647811-10647729   CU929527,CH242-208E7,2:10646579-10663775
(Clone quality: bE208E7 on chr=2; Num_of_Contigs=8; )
LPXN location ⇒ 2:10648095-10647923   CU929527,CH242-208E7,2:10646579-10663775
(Clone quality: bE208E7 on chr=2; Num_of_Contigs=8; )
LPXN location ⇒ 2:10696857-10696586   CU929527,CH242-208E7,2:10663876-10697680
(Clone quality: bE208E7 on chr=2; Num_of_Contigs=8; )
LPXN location ⇒ 2:10697313-10697166   CU929527,CH242-208E7,2:10663876-10697680
(Clone quality: bE208E7 on chr=2; Num_of_Contigs=8; )
LRAP ENSSSCG00000012113 X:6897468-6905140 CU606962,CH242-327M2,X:6867423-6949755
(Clone quality: bE327M2 on chr=X; Num_of_Contigs=5; ) 		 
LRAP ENSSSCG00000014172 2:92604759-92652037    
LRAP location ⇒ 2:92645278-92645464   CU463957,CH242-355F23,2:92636562-92731350
(Clone quality: bE355F23 on chr=2; Num_of_Contigs=3; )
LRAP location ⇒ 2:92648222-92648383   CU463957,CH242-355F23,2:92636562-92731350
(Clone quality: bE355F23 on chr=2; Num_of_Contigs=3; )
LRAP location ⇒ 2:92648899-92649039   CU463957,CH242-355F23,2:92636562-92731350
(Clone quality: bE355F23 on chr=2; Num_of_Contigs=3; )
LRAP location ⇒ 2:92651757-92651957   CU463957,CH242-355F23,2:92636562-92731350
(Clone quality: bE355F23 on chr=2; Num_of_Contigs=3; )
LRAT ENSSSCG00000008995 8:63849701-63855268   CU855658,CH242-343C20,8:63840476-63858401
(Clone quality: bE343C20 on chr=8; Num_of_Contigs=1; )
LRAT location ⇒ 8:101837691-101837748   CU582967,CH242-212L19,8:101814840-101905972
(Clone quality: bE212L19 on chr=8; Num_of_Contigs=2; )
LRAT location ⇒ 8:48101385-48101305   CU984592,CH242-325A10,8:48098523-48103226
(Clone quality: bE325A10 on chr=8; Num_of_Contigs=1; )
LRAT location ⇒ 8:6319771-6319715   CU861522,CH242-143J20,8:6154772-6327389
(Clone quality: bE143J20 on chr=8; Num_of_Contigs=1; )
LRAT location ⇒ 8:9111108-9111182   CU861948,CH242-21D22,8:9089237-9121820
(Clone quality: bE21D22 on chr=8; Num_of_Contigs=6; )
LRBA ENSSSCG00000009021 8:67520794-67699712    
LRBA location ⇒ 8:67642449-67642592   CU930025,CH242-53B19,8:67635419-67671007
(Clone quality: bE53B19 on chr=8; Num_of_Contigs=7; )
LRBA location ⇒ 8:67643625-67643745   CU930025,CH242-53B19,8:67635419-67671007
(Clone quality: bE53B19 on chr=8; Num_of_Contigs=7; )
LRBA location ⇒ 8:67663066-67663221   CU930025,CH242-53B19,8:67635419-67671007
(Clone quality: bE53B19 on chr=8; Num_of_Contigs=7; )
LRBA location ⇒ 8:67699543-67699712   CU930025,CH242-53B19,8:67695879-67711032
(Clone quality: bE53B19 on chr=8; Num_of_Contigs=7; )
LRCH1   ENSSSCG00000009408 11:20135239-20190078    
LRCH2   ENSSSCG00000012595 X:92414132-92484575    
LRCH3   ENSSSCG00000011854 13:101160312-101290862 CU694544,CH242-123C16,13:101156837-101363233
(Clone quality: bE123C16 on chr=13; Num_of_Contigs=6; ) 		 
LRCH4   ENSSSCG00000007667 3:6832679-6836677   CU928563,CH242-369L8,3:6786261-6837493
(Clone quality: bE369L8 on chr=3; Num_of_Contigs=1; )
LRDD ENSSSCG00000012843 2:162398-167169   CU928976,CH242-144M19,2:43742-170991
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
LRFN1   ENSSSCG00000010704 14:138590160-138596493   FP236263,CH242-159G20,14:138579773-138601634
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
LRFN2 ENSSSCG00000001597 7:40889769-40933543   CT954262,CH242-238C20,7:40851623-40988661
(Clone quality: bE238C20 on chr=7; Num_of_Contigs=5; )
LRFN2 location ⇒ 7:40890161-40890497   CT954262,CH242-238C20,7:40851623-40988661
(Clone quality: bE238C20 on chr=7; Num_of_Contigs=5; )
LRFN3 ENSSSCG00000002927 6:30611573-30616768   CU694686,CH242-213I9,6:30589336-30651658
(Clone quality: bE213I9 on chr=6; Num_of_Contigs=4; )
LRFN3 location ⇒ 6:30613086-30612463   CU694686,CH242-213I9,6:30589336-30651658
(Clone quality: bE213I9 on chr=6; Num_of_Contigs=4; )
LRFN4 location ⇒ 12:33236803-33237044   CU655859,CH242-236B21,12:33234124-33242210
(Clone quality: bE236B21 on chr=12; Num_of_Contigs=9; )
LRFN5 ENSSSCG00000004990 1:180830424-180849441   CU019577,CH242-29O16,1:180794886-180906831
(Clone quality: bE29O16 on chr=1; Num_of_Contigs=3; )
LRFN5 location ⇒ 1:180834839-180835196   CU019577,CH242-29O16,1:180794886-180906831
(Clone quality: bE29O16 on chr=1; Num_of_Contigs=3; )
LRG1   ENSSSCG00000013514 2:48727370-48729432   CU972396,CH242-401E10,2:48706443-48734965
(Clone quality: bE401E10 on chr=2; Num_of_Contigs=4; )
LRGUK   ENSSSCG00000016542 18:13226670-13337122    
LRIG1 ENSSSCG00000011499 13:40001091-40242551    
LRIG2 ENSSSCG00000006768 4:111807177-111866020   CU184668,CH242-412F6,4:111720118-111866627
(Clone quality: bE412F6 on chr=4; Num_of_Contigs=2; )
LRIG2 location ⇒ 4:111708425-111708013   CU302354,CH242-270N8,4:111667126-111717007
(Clone quality: bE270N8 on chr=4; Num_of_Contigs=3; )
LRIG2 location ⇒ 4:111865745-111866021   CU184668,CH242-412F6,4:111720118-111866627
(Clone quality: bE412F6 on chr=4; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team