A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ETV2 ENSSSCG00000002906 6:30323213-30325308    
ETV3 ENSSSCG00000006459 4:96659601-96668117   CU151863,CH242-258G22,4:96658047-96697259
(Clone quality: bE258G22 on chr=4; Num_of_Contigs=6; )
ETV4   ENSSSCG00000017379 12:17481240-17497470   FP102477,CH242-134N6,12:17464819-17497627
(Clone quality: bE134N6 on chr=12; Num_of_Contigs=2; )
ETV6 ENSSSCG00000000621 5:57040341-57071866    
ETV6 location ⇒ 5:57040902-57040355   CU459114,CH242-375L4,5:57037896-57047299
(Clone quality: bE375L4 on chr=5; Num_of_Contigs=4; )
ETV6 location ⇒ 5:57071868-57071700   CU459114,CH242-375L4,5:57050816-57079906
(Clone quality: bE375L4 on chr=5; Num_of_Contigs=4; )
ETV6 location ⇒ 5:57140443-57140587   CU459114,CH242-375L4,5:57133326-57150177
(Clone quality: bE375L4 on chr=5; Num_of_Contigs=4; )
ETV6 location ⇒ 5:57147089-57147711   CU459114,CH242-375L4,5:57133326-57150177
(Clone quality: bE375L4 on chr=5; Num_of_Contigs=4; )
ETV7   ENSSSCG00000001561 7:36719082-36737917    
EVA1 ENSSSCG00000015091 9:44452413-44463512   CU914235,CH242-177G19,9:44427804-44486043
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
EVA1 location ⇒ 9:44455424-44455348   CU914235,CH242-177G19,9:44427804-44486043
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
EVA1 location ⇒ 9:44461578-44461368   CU914235,CH242-177G19,9:44427804-44486043
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
EVA1 location ⇒ 9:44462021-44461850   CU914235,CH242-177G19,9:44427804-44486043
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
EVA1 location ⇒ 9:44463453-44463267   CU914235,CH242-177G19,9:44427804-44486043
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
EVC2   ENSSSCG00000008705 8:1878818-1878955   FP102829,CH242-276D17,8:1872970-1880039
(Clone quality: bE276D17 on chr=8; Num_of_Contigs=22; )
EVI2A ENSSSCG00000017749 12:41328949-41329635   CU469262,CH242-13F24,12:41301947-41331750
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
EVI2A location ⇒ 12:41324953-41325131   CU469262,CH242-13F24,12:41301947-41331750
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
EVI2A location ⇒ 12:41328926-41330285   CU469262,CH242-13F24,12:41301947-41331750
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
EVI2B   ENSSSCG00000017750 12:41340090-41341469   CU469262,CH242-13F24,12:41331851-41361647
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
EVI5   ENSSSCG00000006901 4:128665273-128810918    
EVI5L   ENSSSCG00000013585 2:51214450-51234029   CU928575,CH242-46K5,2:51207907-51253747
(Clone quality: bE46K5 on chr=2; Num_of_Contigs=5; )
EVL ENSSSCG00000002513 7:130257886-130314992    
EVL location ⇒ 7:130155108-130155561   CU640436,CH242-139P20,7:130153826-130175676
(Clone quality: bE139P20 on chr=7; Num_of_Contigs=19; )
EVL location ⇒ 7:130261065-130260942   CU640436,CH242-139P20,7:130257697-130293601
(Clone quality: bE139P20 on chr=7; Num_of_Contigs=19; )
EVL location ⇒ 7:130291033-130290868   CU640436,CH242-139P20,7:130257697-130293601
(Clone quality: bE139P20 on chr=7; Num_of_Contigs=19; )
EVL location ⇒ 7:130419217-130419670   CU914713,CH242-352I21,7:130406153-130421533
(Clone quality: bE352I21 on chr=7; Num_of_Contigs=15; )
EVPL   ENSSSCG00000017192 12:3768167-3784729   CU928029,CH242-304M1,12:3750666-3894443
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
EVX1   ENSSSCG00000016696 18:44112463-44115922   CU480612,CH242-239C23,18:44070219-44158051
(Clone quality: bE239C23 on chr=18; Num_of_Contigs=6; )
EWSR1 ENSSSCG00000009974 14:46891209-46993291    
EWSR1 location ⇒ 14:46992423-46992677   CU640468,CH242-29E17,14:46915130-47026947
(Clone quality: bE29E17 on chr=14; Num_of_Contigs=3; )
EWSR1 location ⇒ 14:46992875-46993088   CU640468,CH242-29E17,14:46915130-47026947
(Clone quality: bE29E17 on chr=14; Num_of_Contigs=3; )
EWSR1 location ⇒ 14:47170884-47170671   CU468008,CH242-428E7,14:47142440-47178163
(Clone quality: bE428E7 on chr=14; Num_of_Contigs=5; )
EWSR1 location ⇒ 14:47171336-47171082   CU468008,CH242-428E7,14:47142440-47178163
(Clone quality: bE428E7 on chr=14; Num_of_Contigs=5; )
EXD1   ENSSSCG00000004752 1:136534077-136584755    
EXD2   ENSSSCG00000002305 7:101283646-101302416    
EXD3   ENSSSCG00000005855 1:294406204-294431198   CU928955,CH242-34I15,1:294396197-294431456
(Clone quality: bE34I15 on chr=1; Num_of_Contigs=4; )
EXO1 ENSSSCG00000010865 10:15132105-15172541    
EXO1 location ⇒ 10:15134005-15134180   FP236767,CH242-255I24,10:15131563-15138052
(Clone quality: bE255I24 on chr=10; Num_of_Contigs=15; )
EXO1 location ⇒ 10:15143119-15143336   FP236767,CH242-255I24,10:15138153-15143978
(Clone quality: bE255I24 on chr=10; Num_of_Contigs=15; )
EXO1 location ⇒ 10:15145067-15145255   FP236767,CH242-255I24,10:15144079-15177329
(Clone quality: bE255I24 on chr=10; Num_of_Contigs=15; )
EXO1 location ⇒ 10:15155072-15155318   FP236767,CH242-255I24,10:15144079-15177329
(Clone quality: bE255I24 on chr=10; Num_of_Contigs=15; )
EXOC2 location ⇒ 7:26270-26443   CU657920,CH242-367F14,7:1-36410
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
EXOC2 location ⇒ 7:311799-311972   CU467789,CH242-514I8,7:285084-380408
(Clone quality: bE514I8 on chr=7; Num_of_Contigs=7; )
EXOC2 location ⇒ 7:341830-341976   CU467789,CH242-514I8,7:285084-380408
(Clone quality: bE514I8 on chr=7; Num_of_Contigs=7; )
EXOC2 location ⇒ 7:56235-56381   CU657920,CH242-367F14,7:36511-75259
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
EXOC3L   ENSSSCG00000002788 6:13359652-13364908   CU929920,CH242-351A16,6:13336930-13369049
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
EXOC5   ENSSSCG00000005066 1:195128057-195163137    
EXOC6   ENSSSCG00000010473 14:109460106-109621572    
EXOC6B   ENSSSCG00000008310 3:64354666-64693992    
EXOC7   ENSSSCG00000017190 12:3701028-3721735   CU694895,CH242-350N8,12:3694656-3721758
(Clone quality: bE350N8 on chr=12; Num_of_Contigs=14; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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