A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LRRTM4 location ⇒ 3:60924318-60924546   CU928789,CH242-60B14,3:60890861-60931295
(Clone quality: bE60B14 on chr=3; Num_of_Contigs=3; )
LRSAM1 ENSSSCG00000005613 1:282315432-282358882    
LRSAM1 location ⇒ 1:282329453-282329361   CU407118,CH242-357D18,1:282321875-282364399
(Clone quality: bE357D18 on chr=1; Num_of_Contigs=10; )
LRSAM1 location ⇒ 1:282333535-282333403   CU407118,CH242-357D18,1:282321875-282364399
(Clone quality: bE357D18 on chr=1; Num_of_Contigs=10; )
LRSAM1 location ⇒ 1:282339524-282339399   CU407118,CH242-357D18,1:282321875-282364399
(Clone quality: bE357D18 on chr=1; Num_of_Contigs=10; )
LRSAM1 location ⇒ 1:282339950-282339808   CU407118,CH242-357D18,1:282321875-282364399
(Clone quality: bE357D18 on chr=1; Num_of_Contigs=10; )
LRTM1   ENSSSCG00000011461 13:31034463-31041600    
LRTM2   ENSSSCG00000000760 5:64594561-64600232   FP102363,CH242-96D13,5:64583970-64614420
(Clone quality: bE96D13 on chr=5; Num_of_Contigs=18; )
LRTOMT   ENSSSCG00000014805 9:6117138-6120128    
LRWD1   ENSSSCG00000007687 3:8216097-8222110   CU861964,CH242-275K10,3:8193129-8225131
(Clone quality: bE275K10 on chr=3; Num_of_Contigs=9; )
LSAMP location ⇒ 13:107780308-107780543   CU633670,CH242-233L17,13:107726358-107809781
(Clone quality: bE233L17 on chr=13; Num_of_Contigs=2; )
LSAMP location ⇒ 13:107849308-107849436   CU915660,CH242-503F15,13:107846278-107869865
(Clone quality: bE503F15 on chr=13; Num_of_Contigs=3; )
LSG1   ENSSSCG00000011827 13:99189140-99217755    
LSHB_PIG   ENSSSCG00000003151 6:37754230-37755346   FP102974,CH242-517N5,6:37749269-37760175
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
LSHB_PIG   ENSSSCG00000003151 6:37754230-37755346   FP102974,CH242-517N5,6:37749269-37760175
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
LSM11   ENSSSCG00000017048 16:63272827-63281066    
LSM14A   ENSSSCG00000002869 6:29095562-29100488   FP103027,CH242-391D14,6:29089301-29101483
(Clone quality: bE391D14 on chr=6; Num_of_Contigs=10; )
LSM14B location ⇒ 6:29278136-29278232   FP103027,CH242-391D14,6:29277309-29284354
(Clone quality: bE391D14 on chr=6; Num_of_Contigs=10; )
LSM3   ENSSSCG00000011601 13:58544185-58553280   CU633560,CH242-223L17,13:58523231-58606594
(Clone quality: bE223L17 on chr=13; Num_of_Contigs=4; )
LSM6   ENSSSCG00000009036 8:71109191-71124834   CU694674,CH242-150K17,8:71093579-71139491
(Clone quality: bE150K17 on chr=8; Num_of_Contigs=7; )
LSM7   ENSSSCG00000013463 2:47258355-47263152   FP089467,CH242-185G23,2:47173729-47314390
(Clone quality: bE185G23 on chr=2; Num_of_Contigs=3; )
LSR   ENSSSCG00000002884 6:30017478-30027169   CU694505,CH242-50N19,6:30017377-30028771
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
LTA ENSSSCG00000000891 5:82399614-82538300    
LTA ENSSSCG00000001403 7:27654922-27656624 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
LTA4H ENSSSCG00000000891 5:82399614-82538300    
LTA4H location ⇒ 5:82399717-82399933   CU525009,CH242-365H5,5:82396162-82407979
(Clone quality: bE365H5 on chr=5; Num_of_Contigs=14; )
LTA4H location ⇒ 5:82457346-82457409   CU525009,CH242-365H5,5:82457061-82459121
(Clone quality: bE365H5 on chr=5; Num_of_Contigs=14; )
LTA4H location ⇒ 5:82458520-82458665   CU525009,CH242-365H5,5:82457061-82459121
(Clone quality: bE365H5 on chr=5; Num_of_Contigs=14; )
LTA4H location ⇒ 5:82538020-82538298   CU633406,CH242-359G18,5:82522629-82542505
(Clone quality: bE359G18 on chr=5; Num_of_Contigs=3; )
LTB ENSSSCG00000001405 7:27663733-27665643 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
LTB4R1 location ⇒ 7:81316299-81315250   CU019590,CH242-406B17,7:81281809-81421007
(Clone quality: bE406B17 on chr=7; Num_of_Contigs=4; )
LTBP1 ENSSSCG00000008510 3:99760388-100136084    
LTBP2 ENSSSCG00000012985 2:5065876-5083899   CU914305,CH242-95H15,2:5062379-5084188
(Clone quality: bE95H15 on chr=2; Num_of_Contigs=19; )
LTBP2 ENSSSCG00000002368 7:105981238-106085228    
LTBP2 location ⇒ 7:106011109-106010945   CU682356,CH242-154M12,7:105945884-106062639
(Clone quality: bE154M12 on chr=7; Num_of_Contigs=2; )
LTBP2 location ⇒ 7:106014673-106014549   CU682356,CH242-154M12,7:105945884-106062639
(Clone quality: bE154M12 on chr=7; Num_of_Contigs=2; )
LTBP2 location ⇒ 7:106151516-106151352   CU498954,CH242-313I6,7:106142464-106197205
(Clone quality: bE313I6 on chr=7; Num_of_Contigs=5; )
LTBP2 location ⇒ 7:106155081-106154957   CU498954,CH242-313I6,7:106142464-106197205
(Clone quality: bE313I6 on chr=7; Num_of_Contigs=5; )
LTBP3   ENSSSCG00000012985 2:5065876-5083899   CU914305,CH242-95H15,2:5062379-5084188
(Clone quality: bE95H15 on chr=2; Num_of_Contigs=19; )
LTBR ENSSSCG00000000706 5:60290018-60296804   CU633552,CH242-193I18,5:60186767-60298754
(Clone quality: bE193I18 on chr=5; Num_of_Contigs=2; )
LTBR location ⇒ 5:60290493-60289940   CU633552,CH242-193I18,5:60186767-60298754
(Clone quality: bE193I18 on chr=5; Num_of_Contigs=2; )
LTC4S ENSSSCG00000014018 2:68146524-68147572   FP015930,CH242-222N20,2:68124440-68148787
(Clone quality: bE222N20 on chr=2; Num_of_Contigs=11; )
LTF location ⇒ 1:289683591-289683742   FP074863,CH242-151E10,1:289681425-289688852
(Clone quality: bE151E10 on chr=1; Num_of_Contigs=9; )
LTF location ⇒ 1:289837298-289837449   FP102268,CH242-95K10,1:289832708-289844981
(Clone quality: bE95K10 on chr=1; Num_of_Contigs=5; )
LTF location ⇒ 8:21223-21118   FP102972,CH242-47L5,8:17398-21329
(Clone quality: bE47L5 on chr=8; Num_of_Contigs=13; )
LTF location ⇒ 8:48273-48212   FP102972,CH242-47L5,8:43508-48739
(Clone quality: bE47L5 on chr=8; Num_of_Contigs=13; )
LTF location ⇒ 8:7304-7413   FP102972,CH242-47L5,8:6630-11538
(Clone quality: bE47L5 on chr=8; Num_of_Contigs=13; )
LTF location ⇒ 8:79830-79721   FP102972,CH242-47L5,8:79654-82980
(Clone quality: bE47L5 on chr=8; Num_of_Contigs=13; )
LTK location ⇒ 1:136274456-136274548   CU633572,CH242-274F1,1:136202998-136286247
(Clone quality: bE274F1 on chr=1; Num_of_Contigs=12; )
LTK location ⇒ 1:136275946-136276043   CU633572,CH242-274F1,1:136202998-136286247
(Clone quality: bE274F1 on chr=1; Num_of_Contigs=12; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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