A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ALOX5AP ENSSSCG00000009330 11:6893556-6904961   CU633223,CH242-163D14,11:6815422-6908794
(Clone quality: bE163D14 on chr=11; Num_of_Contigs=6; )
ALOX5AP location ⇒ 11:6900795-6900712   CU633223,CH242-163D14,11:6815422-6908794
(Clone quality: bE163D14 on chr=11; Num_of_Contigs=6; )
ALOXE3 ENSSSCG00000017981 12:50537437-50558025    
ALOXE3 location ⇒ 12:50517265-50517153   CU914306,CH242-98O15,12:50484156-50527029
(Clone quality: bE98O15 on chr=12; Num_of_Contigs=9; )
ALOXE3 location ⇒ 12:50518944-50518799   CU914306,CH242-98O15,12:50484156-50527029
(Clone quality: bE98O15 on chr=12; Num_of_Contigs=9; )
ALOXE3 location ⇒ 12:50519425-50519156   CU914306,CH242-98O15,12:50484156-50527029
(Clone quality: bE98O15 on chr=12; Num_of_Contigs=9; )
ALOXE3 location ⇒ 12:50531291-50531191   CU914306,CH242-98O15,12:50530882-50533711
(Clone quality: bE98O15 on chr=12; Num_of_Contigs=9; )
ALPK1   ENSSSCG00000009127 8:94658948-94691301    
ALPK2 ENSSSCG00000004918 1:169139942-169259478    
ALPK2 location ⇒ 1:169233793-169233860   CU062642,CH242-134P7,1:169203774-169351450
(Clone quality: bE134P7 on chr=1; Num_of_Contigs=3; )
ALPK2 location ⇒ 1:169240209-169240428   CU062642,CH242-134P7,1:169203774-169351450
(Clone quality: bE134P7 on chr=1; Num_of_Contigs=3; )
ALPK2 location ⇒ 1:169245492-169245543   CU062642,CH242-134P7,1:169203774-169351450
(Clone quality: bE134P7 on chr=1; Num_of_Contigs=3; )
ALPK2 location ⇒ 1:169258960-169259478   CU062642,CH242-134P7,1:169203774-169351450
(Clone quality: bE134P7 on chr=1; Num_of_Contigs=3; )
ALPK3 ENSSSCG00000002631 7:136216218-136225447   FP016021,CH242-244E9,7:136214292-136232925
(Clone quality: bE244E9 on chr=7; Num_of_Contigs=3; )
ALPK3 location ⇒ 7:136225112-136225545   FP016021,CH242-244E9,7:136214292-136232925
(Clone quality: bE244E9 on chr=7; Num_of_Contigs=3; )
ALR ENSSSCG00000008035 3:36365060-36367569   FP102350,CH242-207G4,3:36359565-36381485
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
ALR location ⇒ 3:36365180-36365450   FP102350,CH242-207G4,3:36359565-36381485
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
ALR location ⇒ 3:36365814-36366013   FP102350,CH242-207G4,3:36359565-36381485
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
ALR location ⇒ 3:36366865-36367565   FP102350,CH242-207G4,3:36359565-36381485
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
ALS2CR11   ENSSSCG00000016107 15:98807101-98830321   CU856083,CH242-118H24,15:98765786-98850094
(Clone quality: bE118H24 on chr=15; Num_of_Contigs=7; )
ALS2CR12   ENSSSCG00000016105 15:98710461-98737344    
ALS2CR8   ENSSSCG00000016117 15:99993494-100192972    
ALX1   ENSSSCG00000000933 5:91573203-91692467    
ALX3   ENSSSCG00000006812 4:114492951-114497478    
ALX4   ENSSSCG00000013280 2:16539274-16539744   CU914469,CH242-397I1,2:16538152-16541973
(Clone quality: bE397I1 on chr=2; Num_of_Contigs=11; )
AMACR   ENSSSCG00000016822 16:17521490-17539070   CU928963,CH242-104B16,16:17505139-17604356
(Clone quality: bE104B16 on chr=16; Num_of_Contigs=4; )
AMBN ENSSSCG00000008937 8:57299297-57312173    
AMBN location ⇒ 8:57299297-57299399   CU928399,CH242-512L3,8:57295651-57304085
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
AMBN location ⇒ 8:57304772-57304884   CU928399,CH242-512L3,8:57304186-57315145
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
AMBN location ⇒ 8:57306304-57306543   CU928399,CH242-512L3,8:57304186-57315145
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
AMBN location ⇒ 8:57311073-57312173   CU928399,CH242-512L3,8:57304186-57315145
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
AMBP ENSSSCG00000005485 1:267724937-267739649   CU407201,CH242-322N22,1:267675230-267763474
(Clone quality: bE322N22 on chr=1; Num_of_Contigs=4; )
AMBP location ⇒ 1:267726491-267726317   CU407201,CH242-322N22,1:267675230-267763474
(Clone quality: bE322N22 on chr=1; Num_of_Contigs=4; )
AMBP location ⇒ 1:267726912-267726743   CU407201,CH242-322N22,1:267675230-267763474
(Clone quality: bE322N22 on chr=1; Num_of_Contigs=4; )
AMBP location ⇒ 1:267738019-267737875   CU407201,CH242-322N22,1:267675230-267763474
(Clone quality: bE322N22 on chr=1; Num_of_Contigs=4; )
AMBP location ⇒ 1:267739455-267739213   CU407201,CH242-322N22,1:267675230-267763474
(Clone quality: bE322N22 on chr=1; Num_of_Contigs=4; )
AMBRA1   ENSSSCG00000013262 2:14249272-14364349   CU467768,CH242-445K9,2:14222547-14372056
(Clone quality: bE445K9 on chr=2; Num_of_Contigs=4; )
AMC2_PIG   ENSSSCG00000008957 8:59498163-59500300   CU928337,CH242-266F15,8:59474833-59511571
(Clone quality: bE266F15 on chr=8; Num_of_Contigs=10; )
AMCF-I ENSSSCG00000008953 8:59305978-59309197   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
AMCF-I location ⇒ 8:59305978-59306124   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
AMCF-I location ⇒ 8:59307142-59307278   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
AMCF-I location ⇒ 8:59308076-59308580   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
AMCF-I location ⇒ 8:59308618-59308999   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
AMD1 ENSSSCG00000004392 1:79080771-79103690    
AMD1 location ⇒ 9:108475091-108474579   FP102846,CH242-165D11,9:108457150-108509916
(Clone quality: bE165D11 on chr=9; Num_of_Contigs=5; )
AMD1 location ⇒ 9:108476249-108475131   FP102846,CH242-165D11,9:108457150-108509916
(Clone quality: bE165D11 on chr=9; Num_of_Contigs=5; )
AMD1 location ⇒ 9:108476473-108476345   FP102846,CH242-165D11,9:108457150-108509916
(Clone quality: bE165D11 on chr=9; Num_of_Contigs=5; )
AMDHD1   ENSSSCG00000000893 5:82572729-82589688    
AMDHD2   ENSSSCG00000008057 3:36852361-36861854   CU929704,CH242-188G24,3:36852127-36879921
(Clone quality: bE188G24 on chr=3; Num_of_Contigs=20; )
AMFR   ENSSSCG00000002822 6:20334371-20347653   CU469156,CH242-239L9,6:20330046-20371308
(Clone quality: bE239L9 on chr=6; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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