A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PLA2G2A location ⇒ 6:53807707-53807908   FP236206,CH242-163P14,6:53760845-53819235
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G2C   ENSSSCG00000003499 6:53921844-53935382   FP236206,CH242-163P14,6:53892728-53945570
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G2D ENSSSCG00000003497 6:53777540-53783773   FP236206,CH242-163P14,6:53760845-53819235
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G2D location ⇒ 6:53609515-53609662   FP016073,CH242-147M21,6:53585388-53637720
(Clone quality: bE147M21 on chr=6; Num_of_Contigs=9; )
PLA2G2D location ⇒ 6:53611770-53612371   FP016073,CH242-147M21,6:53585388-53637720
(Clone quality: bE147M21 on chr=6; Num_of_Contigs=9; )
PLA2G2D location ⇒ 6:53780944-53781091   FP236206,CH242-163P14,6:53760845-53819235
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G2D location ⇒ 6:53783200-53783801   FP236206,CH242-163P14,6:53760845-53819235
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G2F   ENSSSCG00000003496 6:53752629-53760405   FP236206,CH242-163P14,6:53749626-53760744
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G4D   ENSSSCG00000004733 1:135513552-135517262   CU041383,CH242-91E9,1:135507220-135568656
(Clone quality: bE91E9 on chr=1; Num_of_Contigs=12; )
PLA2G4E   ENSSSCG00000004734 1:135687454-135706137   CU466957,CH242-240E5,1:135679779-135749270
(Clone quality: bE240E5 on chr=1; Num_of_Contigs=7; )
PLA2G4F   ENSSSCG00000004732 1:135452739-135464565    
PLA2G5 location ⇒ 6:53628627-53628543   FP016073,CH242-147M21,6:53585388-53637720
(Clone quality: bE147M21 on chr=6; Num_of_Contigs=9; )
PLA2G5 location ⇒ 6:53632431-53632352   FP016073,CH242-147M21,6:53585388-53637720
(Clone quality: bE147M21 on chr=6; Num_of_Contigs=9; )
PLA2G5 location ⇒ 6:53800121-53800037   FP236206,CH242-163P14,6:53760845-53819235
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G6 ENSSSCG00000000110 5:6230165-6283395   FP102898,CH242-409K2,5:6224754-6284089
(Clone quality: bE409K2 on chr=5; Num_of_Contigs=6; )
PLA2G6 location ⇒ 5:6100691-6100877 BX296548,PigE-193I9,5:5978065-6150316
(Clone quality: bT193I9 on chr=5; Num_of_Contigs=8; ) 		 
PLA2G6 location ⇒ 5:6102858-6103050 BX296548,PigE-193I9,5:5978065-6150316
(Clone quality: bT193I9 on chr=5; Num_of_Contigs=8; ) 		 
PLA2G6 location ⇒ 5:6247284-6247470   FP102898,CH242-409K2,5:6224754-6284089
(Clone quality: bE409K2 on chr=5; Num_of_Contigs=6; )
PLA2G6 location ⇒ 5:6249451-6249643   FP102898,CH242-409K2,5:6224754-6284089
(Clone quality: bE409K2 on chr=5; Num_of_Contigs=6; )
PLA2G7 ENSSSCG00000001723 7:48889662-48932973    
PLA2G7 location ⇒ 7:48890120-48889866   CU607063,CH242-261A14,7:48866108-48898664
(Clone quality: bE261A14 on chr=7; Num_of_Contigs=10; )
PLA2G7 location ⇒ 7:48891566-48891413   CU607063,CH242-261A14,7:48866108-48898664
(Clone quality: bE261A14 on chr=7; Num_of_Contigs=10; )
PLA2G7 location ⇒ 7:48894219-48894045   CU607063,CH242-261A14,7:48866108-48898664
(Clone quality: bE261A14 on chr=7; Num_of_Contigs=10; )
PLA2G7 location ⇒ 7:48932960-48932795 CT967297,CH242-157K17,7:48911843-49089775
(Clone quality: bE157K17 on chr=7; Num_of_Contigs=1; ) 		 
PLA2R1 ENSSSCG00000015885 15:62251443-62310921    
PLAA ENSSSCG00000005126 1:205417486-205460665    
PLAA location ⇒ 1:205446643-205446864   CU313306,CH242-263I20,1:205257395-205450475
(Clone quality: bE263I20 on chr=1; Num_of_Contigs=1; )
PLAA location ⇒ 1:205448654-205448732   CU313306,CH242-263I20,1:205257395-205450475
(Clone quality: bE263I20 on chr=1; Num_of_Contigs=1; )
PLAA location ⇒ 1:205451954-205452025   CU915318,CH242-212E2,1:205450476-205470362
(Clone quality: bE212E2 on chr=1; Num_of_Contigs=5; )
PLAA location ⇒ 1:205459919-205460695   CU915318,CH242-212E2,1:205450476-205470362
(Clone quality: bE212E2 on chr=1; Num_of_Contigs=5; )
PLAC1   ENSSSCG00000012684 X:108514833-108515351   CU639462,CH242-164F18,X:108497189-108549869
(Clone quality: bE164F18 on chr=X; Num_of_Contigs=3; )
PLAC8 ENSSSCG00000014408 2:133565168-133589118   CU928414,CH242-495G3,2:133557524-133651075
(Clone quality: bE495G3 on chr=2; Num_of_Contigs=5; )
PLAC8 ENSSSCG00000009240 8:116364509-116392802   CU694671,CH242-135K3,8:116354156-116447271
(Clone quality: bE135K3 on chr=8; Num_of_Contigs=3; )
PLAC8 location ⇒ 8:116379731-116379782   CU694671,CH242-135K3,8:116354156-116447271
(Clone quality: bE135K3 on chr=8; Num_of_Contigs=3; )
PLAC8 location ⇒ 8:116387917-116388016   CU694671,CH242-135K3,8:116354156-116447271
(Clone quality: bE135K3 on chr=8; Num_of_Contigs=3; )
PLAC8L1   ENSSSCG00000014408 2:133565168-133589118   CU928414,CH242-495G3,2:133557524-133651075
(Clone quality: bE495G3 on chr=2; Num_of_Contigs=5; )
PLAC9   ENSSSCG00000010332 14:85349904-85361121   CU468437,CH242-56P17,14:85319973-85443215
(Clone quality: bE56P17 on chr=14; Num_of_Contigs=3; )
PLAG1   ENSSSCG00000006247 4:78584050-78586044   CU407092,CH242-518H24,4:78579444-78680435
(Clone quality: bE518H24 on chr=4; Num_of_Contigs=5; )
PLAGL2 ENSSSCG00000007243 17:37824498-37836421   CU928633,CH242-263B18,17:37807325-37865251
(Clone quality: bE263B18 on chr=17; Num_of_Contigs=9; )
PLAL1_PIG   ENSSSCG00000004127 1:22330280-22350417   CU861515,CH242-118D7,1:22209109-22355773
(Clone quality: bE118D7 on chr=1; Num_of_Contigs=2; )
PLAT ENSSSCG00000007032 17:11916833-11945174    
PLAT location ⇒ 17:18767-18836   CU855955,CH242-102E13,17:16852-18996
(Clone quality: bE102E13 on chr=17; Num_of_Contigs=18; )
PLAT location ⇒ 17:18978-18861   CU855955,CH242-102E13,17:16852-18996
(Clone quality: bE102E13 on chr=17; Num_of_Contigs=18; )
PLAT location ⇒ 17:25397-25486   CU855955,CH242-102E13,17:19097-28601
(Clone quality: bE102E13 on chr=17; Num_of_Contigs=18; )
PLAT location ⇒ 17:25500-25391   CU855955,CH242-102E13,17:19097-28601
(Clone quality: bE102E13 on chr=17; Num_of_Contigs=18; )
PLAU ENSSSCG00000010312 14:79931353-79937213   CU640439,CH242-168L21,14:79906302-80025524
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
PLAU location ⇒ 14:79930372-79937127   CU640439,CH242-168L21,14:79906302-80025524
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
PLAU location ⇒ 14:79933584-79933804   CU640439,CH242-168L21,14:79906302-80025524
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
PLAU location ⇒ 14:79936092-79937127   CU640439,CH242-168L21,14:79906302-80025524
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
PLAU location ⇒ 14:79937180-79937530   CU640439,CH242-168L21,14:79906302-80025524
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-1900, 1901-1950, 1951-2000, 2001-2050, 2051-2100, 2101-2150, 2151-2200, 2201-21

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team