A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
A5D9K3_PIG   ENSSSCG00000001452 7:29035239-29043915 BX323846,PigI-43B6,7:28994357-29074505
(No clone quality info on bS43B6) 		 
A5D9K3_PIG   ENSSSCG00000001452 7:29035239-29043915 BX323846,PigI-43B6,7:28994357-29074505
(No clone quality info on bS43B6) 		 
A5D9K3_PIG   ENSSSCG00000001446 7:28948106-28956782 CT797454,CH242-173D7,7:28821097-28994356
(Clone quality: bE173D7 on chr=7; Num_of_Contigs=2; ) 		 
A5D9N4_PIG   ENSSSCG00000001406 7:27669756-27671804 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
A5GFM6_PIG   ENSSSCG00000003279 6:40899402-40920623 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
A5GFM6_PIG   ENSSSCG00000003279 6:40899402-40920623 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
A5GFM7_PIG   ENSSSCG00000003285 6:41168151-41174583   FP102421,CH242-120N16,6:41167356-41195579
(Clone quality: bE120N16 on chr=6; Num_of_Contigs=6; )
A5GFM7_PIG   ENSSSCG00000003280 6:40934296-40940693 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
A5GFS4_PIG   ENSSSCG00000007506 17:60465981-60471412 CR956420,CH242-37G9,17:60416772-60480047
(No clone quality info on bE37G9) 		 
A5GFS4_PIG   ENSSSCG00000007507 17:60536173-60542225 CR956387,CH242-148I13,17:60485048-60551849
(No clone quality info on bE148I13) 		 
A5GFT7_PIG   ENSSSCG00000007519 17:61602849-61603601 CR956413,CH242-178F16,17:61584907-61655967
(No clone quality info on bE178F16) 		 
A5HMU5_PIG   ENSSSCG00000006006 4:19687270-19715176   CU469008,CH242-30A22,4:19674563-19721713
(Clone quality: bE30A22 on chr=4; Num_of_Contigs=4; )
A5Z0F5_PIG   ENSSSCG00000009032 8:70251597-70254511    
A6N1V5_PIG   ENSSSCG00000000616 5:56334946-56339352   CU914314,CH242-184F21,5:56304453-56363464
(Clone quality: bE184F21 on chr=5; Num_of_Contigs=6; )
A6N1V5_PIG   ENSSSCG00000000617 5:56463580-56483812   CU861568,CH242-66A4,5:56447456-56492220
(Clone quality: bE66A4 on chr=5; Num_of_Contigs=4; )
A6P341_PIG   ENSSSCG00000002053 7:82840295-82840741   CU469449,CH242-94J9,7:82766326-82906347
(Clone quality: bE94J9 on chr=7; Num_of_Contigs=2; )
A6P369_PIG   ENSSSCG00000002046 7:82618576-82618635   CU407030,CH242-171E18,7:82618242-82670161
(Clone quality: bE171E18 on chr=7; Num_of_Contigs=3; )
A6P371_PIG   ENSSSCG00000002047 7:82620451-82620513   CU407030,CH242-171E18,7:82618242-82670161
(Clone quality: bE171E18 on chr=7; Num_of_Contigs=3; )
A6P372_PIG   ENSSSCG00000002048 7:82620954-82621013   CU407030,CH242-171E18,7:82618242-82670161
(Clone quality: bE171E18 on chr=7; Num_of_Contigs=3; )
A6P374_PIG   ENSSSCG00000002049 7:82624497-82624556   CU407030,CH242-171E18,7:82618242-82670161
(Clone quality: bE171E18 on chr=7; Num_of_Contigs=3; )
A6P375_PIG   ENSSSCG00000002055 7:82911160-82911681   CU468882,CH242-63B2,7:82906348-82953449
(Clone quality: bE63B2 on chr=7; Num_of_Contigs=5; )
A6P380_PIG   ENSSSCG00000002059 7:83026521-83027062   CU468882,CH242-63B2,7:83001624-83076399
(Clone quality: bE63B2 on chr=7; Num_of_Contigs=5; )
A6P380_PIG   ENSSSCG00000002067 7:83154216-83154757   CU571294,CH242-414N2,7:83105900-83181462
(Clone quality: bE414N2 on chr=7; Num_of_Contigs=4; )
A6P384_PIG   ENSSSCG00000002056 7:82950405-82950937   CU468882,CH242-63B2,7:82906348-82953449
(Clone quality: bE63B2 on chr=7; Num_of_Contigs=5; )
A6P386_PIG   ENSSSCG00000002072 7:83268132-83268689   CU467527,CH242-199B11,7:83263648-83283232
(Clone quality: bE199B11 on chr=7; Num_of_Contigs=11; )
A6P387_PIG   ENSSSCG00000002064 7:83087036-83087622   CU571294,CH242-414N2,7:83076400-83089237
(Clone quality: bE414N2 on chr=7; Num_of_Contigs=4; )
A6P388_PIG   ENSSSCG00000002063 7:83078861-83079614   CU571294,CH242-414N2,7:83076400-83089237
(Clone quality: bE414N2 on chr=7; Num_of_Contigs=4; )
A6P389_PIG   ENSSSCG00000002068 7:83179003-83179535   CU571294,CH242-414N2,7:83105900-83181462
(Clone quality: bE414N2 on chr=7; Num_of_Contigs=4; )
A6P389_PIG   ENSSSCG00000002061 7:83051307-83051839   CU468882,CH242-63B2,7:83001624-83076399
(Clone quality: bE63B2 on chr=7; Num_of_Contigs=5; )
A7J153_PIG   ENSSSCG00000007262 17:38733274-38756096   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
A7KZS0_PIG   ENSSSCG00000013842 2:60424691-60439536   CU942397,CH242-289F11,2:60411276-60446933
(Clone quality: bE289F11 on chr=2; Num_of_Contigs=10; )
A7L5K8_PIG   ENSSSCG00000008153 3:47027251-47173691    
A7LJT9_PIG   ENSSSCG00000005045 1:191958923-191962554   CU914537,CH242-195D20,1:191954090-191963039
(Clone quality: bE195D20 on chr=1; Num_of_Contigs=14; )
A7LLU5_PIG   ENSSSCG00000005046 1:191972571-191978017    
A7Y1V1_PIG   ENSSSCG00000008641 3:117233188-117250847    
A8D349_PIG   ENSSSCG00000000253 5:16786964-16790518   CU469296,CH242-241K11,5:16786963-16792552
(Clone quality: bE241K11 on chr=5; Num_of_Contigs=15; )
A8D8Q7_PIG   ENSSSCG00000012834 2:4779-5401   CU928976,CH242-144M19,2:1-32533
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
A8DRG4_PIG   ENSSSCG00000009108 8:90060686-90075419   FP015847,CH242-87K15,8:90058434-90085471
(Clone quality: bE87K15 on chr=8; Num_of_Contigs=3; )
A8UHA7_PIG   ENSSSCG00000013071 2:7816807-7830829   CU914654,CH242-267E20,2:7800942-7832178
(Clone quality: bE267E20 on chr=2; Num_of_Contigs=5; )
A8UHA7_PIG   ENSSSCG00000013071 2:7816807-7830829   CU914654,CH242-267E20,2:7800942-7832178
(Clone quality: bE267E20 on chr=2; Num_of_Contigs=5; )
A8UHA7_PIG   ENSSSCG00000013075 2:7986551-8000575   CU914494,CH242-176B17,2:7952685-8028591
(Clone quality: bE176B17 on chr=2; Num_of_Contigs=9; )
A8UHA7_PIG   ENSSSCG00000013075 2:7986551-8000575   CU914494,CH242-176B17,2:7952685-8028591
(Clone quality: bE176B17 on chr=2; Num_of_Contigs=9; )
A8WC97_PIG   ENSSSCG00000003531 6:55934725-55987824    
A8WC97_PIG   ENSSSCG00000003531 6:55934725-55987824    
A9EEN2_PIG   ENSSSCG00000005161 1:210535109-210535609   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
A9LLK5_PIG   ENSSSCG00000005033 1:190320414-190331443   CU651561,CH242-138M14,1:190319425-190343071
(Clone quality: bE138M14 on chr=1; Num_of_Contigs=15; )
A9LLK5_PIG   ENSSSCG00000005032 1:190254035-190265062   CU571369,CH242-523L1,1:190155010-190315370
(Clone quality: bE523L1 on chr=1; Num_of_Contigs=2; )
A9X3X9_PIG   ENSSSCG00000005107 1:200792569-200794094   CU062610,CH242-90N8,1:200791196-200813703
(Clone quality: bE90N8 on chr=1; Num_of_Contigs=4; )
A9X945_PIG   ENSSSCG00000006886 4:127073090-127073326   CU639441,CH242-134D14,4:127050021-127073966
(Clone quality: bE134D14 on chr=4; Num_of_Contigs=7; )
A9YUA7_PIG   ENSSSCG00000007722 3:9876896-9955615    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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