A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TP53RK location ⇒ 17:63477105-63477163   CU024891,CH242-4B3,17:63462168-63502370
(Clone quality: bE4B3 on chr=17; Num_of_Contigs=3; )
Tp55 ENSSSCG00000000705 5:60215579-60220962   CU633552,CH242-193I18,5:60186767-60298754
(Clone quality: bE193I18 on chr=5; Num_of_Contigs=2; )
Tp55 ENSSSCG00000004891 1:165039220-165083424 CU074278,CH242-106E19,1:164951958-165118980
(Clone quality: bE106E19 on chr=1; Num_of_Contigs=1; ) 		 
TP73 ENSSSCG00000003361 6:43772690-43776772   FP102698,CH242-39I24,6:43772623-43778408
(Clone quality: bE39I24 on chr=6; Num_of_Contigs=5; )
TP73 location ⇒ 12:49994103-49994232 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP73 location ⇒ 12:49994678-49994863 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP73 location ⇒ 12:49995295-49995392 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP73 location ⇒ 12:49995716-49995853 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP73L location ⇒ 13:96119069-96119188   CU582951,CH242-333I15,13:96108050-96191698
(Clone quality: bE333I15 on chr=13; Num_of_Contigs=6; )
TP73L location ⇒ 13:96120486-96120599   CU582951,CH242-333I15,13:96108050-96191698
(Clone quality: bE333I15 on chr=13; Num_of_Contigs=6; )
TP73L location ⇒ 13:96121255-96121389   CU582951,CH242-333I15,13:96108050-96191698
(Clone quality: bE333I15 on chr=13; Num_of_Contigs=6; )
TP73L location ⇒ 13:96125916-96126011   CU582951,CH242-333I15,13:96108050-96191698
(Clone quality: bE333I15 on chr=13; Num_of_Contigs=6; )
TPBG ENSSSCG00000004458 1:88433813-88435072   CU464077,CH242-512I2,1:88412313-88539788
(Clone quality: bE512I2 on chr=1; Num_of_Contigs=3; )
TPBG location ⇒ 1:88434295-88433443   CU464077,CH242-512I2,1:88412313-88539788
(Clone quality: bE512I2 on chr=1; Num_of_Contigs=3; )
TPCN1 ENSSSCG00000009879 14:39086164-39116473    
TPCN1 location ⇒ 14:39044209-39043982   CU694784,CH242-25E24,14:39012535-39068658
(Clone quality: bE25E24 on chr=14; Num_of_Contigs=11; )
TPCN1 location ⇒ 14:39086173-39086354   CU694784,CH242-25E24,14:39084361-39089489
(Clone quality: bE25E24 on chr=14; Num_of_Contigs=11; )
TPCN1 location ⇒ 14:39105721-39105778   CU468469,CH242-242L24,14:39091266-39137232
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
TPCN1 location ⇒ 14:39106928-39106991   CU468469,CH242-242L24,14:39091266-39137232
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
TPCN2   ENSSSCG00000012875 2:2298255-2314866   CU463344,CH242-408M2,2:2296788-2331536
(Clone quality: bE408M2 on chr=2; Num_of_Contigs=8; )
TPD52 ENSSSCG00000006156 4:58279022-58601334    
TPD52L1   ENSSSCG00000004225 1:39303578-39341538    
TPH1   ENSSSCG00000013372 2:38320971-38349071   CU467662,CH242-10M15,2:38299310-38431848
(Clone quality: bE10M15 on chr=2; Num_of_Contigs=1; )
TPI1   ENSSSCG00000000685 5:59905059-59906983   CU457492,CH242-370K21,5:59905019-59907424
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
TPK1   ENSSSCG00000015462 9:105911443-106181067    
TPM1 ENSSSCG00000004570 1:112381950-112405205   CU442742,CH242-335N3,1:112355527-112431981
(Clone quality: bE335N3 on chr=1; Num_of_Contigs=5; )
TPM2 ENSSSCG00000005316 1:247494585-247502040   CU062658,CH242-97C14,1:247426659-247546707
(Clone quality: bE97C14 on chr=1; Num_of_Contigs=2; )
TPM3_PIG   ENSSSCG00000006556 4:99586516-99616404   CU856218,CH242-277E7,4:99581855-99647066
(Clone quality: bE277E7 on chr=4; Num_of_Contigs=4; )
TPM3_PIG   ENSSSCG00000006556 4:99586516-99616404   CU856218,CH242-277E7,4:99581855-99647066
(Clone quality: bE277E7 on chr=4; Num_of_Contigs=4; )
TPM3_PIG   ENSSSCG00000006556 4:99586516-99616404   CU856218,CH242-277E7,4:99581855-99647066
(Clone quality: bE277E7 on chr=4; Num_of_Contigs=4; )
TPM4   ENSSSCG00000013849 2:60590061-60612089    
TPMT   ENSSSCG00000001073 7:14452994-14481617    
TPO ENSSSCG00000008656 3:121296853-121321119   FP102317,CH242-206A23,3:121296456-121349796
(Clone quality: bE206A23 on chr=3; Num_of_Contigs=8; )
TPO ENSSSCG00000008654 3:121238336-121262947    
TPO ENSSSCG00000003947 6:120231429-120237080   CU694684,CH242-210N13,6:120225876-120239718
(Clone quality: bE210N13 on chr=6; Num_of_Contigs=11; )
TPO location ⇒ 3:121255677-121255896   FP102546,CH242-120C6,3:121246108-121262479
(Clone quality: bE120C6 on chr=3; Num_of_Contigs=5; )
TPO location ⇒ 3:121256318-121256522   FP102546,CH242-120C6,3:121246108-121262479
(Clone quality: bE120C6 on chr=3; Num_of_Contigs=5; )
TPO location ⇒ 3:121302617-121302413   FP102317,CH242-206A23,3:121296456-121349796
(Clone quality: bE206A23 on chr=3; Num_of_Contigs=8; )
TPO location ⇒ 3:121303258-121303039   FP102317,CH242-206A23,3:121296456-121349796
(Clone quality: bE206A23 on chr=3; Num_of_Contigs=8; )
TPP1 location ⇒ 14:131629-131706   CU571022,CH242-21I12,14:8902-208834
(Clone quality: bE21I12 on chr=14; Num_of_Contigs=5; )
TPP1 location ⇒ 14:173018-172909   CU571022,CH242-21I12,14:8902-208834
(Clone quality: bE21I12 on chr=14; Num_of_Contigs=5; )
TPP1 location ⇒ 14:225906-225983   CU633261,CH242-269B17,14:219774-303690
(Clone quality: bE269B17 on chr=14; Num_of_Contigs=4; )
TPP1 location ⇒ 14:267874-267765   CU633261,CH242-269B17,14:219774-303690
(Clone quality: bE269B17 on chr=14; Num_of_Contigs=4; )
TPP2 ENSSSCG00000009528 11:71772523-71833522    
TPP2 location ⇒ 11:71834469-71834737   CU915499,CH242-3J3,11:71833999-71834870
(Clone quality: bE3J3 on chr=11; Num_of_Contigs=4; )
TPP2 location ⇒ 11:71841711-71841954   CU915499,CH242-3J3,11:71840615-71846060
(Clone quality: bE3J3 on chr=11; Num_of_Contigs=4; )
TPP2 location ⇒ 11:71842210-71842286   CU915499,CH242-3J3,11:71840615-71846060
(Clone quality: bE3J3 on chr=11; Num_of_Contigs=4; )
TPP2 location ⇒ 11:71861802-71862364   CU915499,CH242-3J3,11:71857643-71879946
(Clone quality: bE3J3 on chr=11; Num_of_Contigs=4; )
TPPP3   ENSSSCG00000002780 6:13165414-13169075   CU929737,CH242-250E5,6:13062455-13202086
(Clone quality: bE250E5 on chr=6; Num_of_Contigs=3; )
TPR   ENSSSCG00000015576 9:119856532-119884150   CU657929,CH242-301H1,9:119854087-120036038
(Clone quality: bE301H1 on chr=9; Num_of_Contigs=1; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-8

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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