A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TRIB3 ENSSSCG00000007208 17:36716172-36752493    
TRIM10 ENSSSCG00000001234 7:24602463-24638703 CU311184,CH242-196B23,7:24509864-24676459
(Clone quality: bE196B23 on chr=7; Num_of_Contigs=3; )
 
TRIM11 ENSSSCG00000014000 2:67002982-67020167 FP015983,CH242-74L12,2:66907442-67096474
(Clone quality: bE74L12 on chr=2; Num_of_Contigs=3; )
 
TRIM11 location ⇒ 2:67004976-67004889 FP015983,CH242-74L12,2:66907442-67096474
(Clone quality: bE74L12 on chr=2; Num_of_Contigs=3; )
 
TRIM11 location ⇒ 2:67005120-67005063 FP015983,CH242-74L12,2:66907442-67096474
(Clone quality: bE74L12 on chr=2; Num_of_Contigs=3; )
 
TRIM11 location ⇒ 2:67011904-67010200 FP015983,CH242-74L12,2:66907442-67096474
(Clone quality: bE74L12 on chr=2; Num_of_Contigs=3; )
 
TRIM13   ENSSSCG00000009389 11:17641278-17642501   CU062573,CH242-415L14,11:17628495-17647998
(Clone quality: bE415L14 on chr=11; Num_of_Contigs=7; )
TRIM14 ENSSSCG00000005374 1:251468742-251495122    
TRIM14 location ⇒ 1:251468346-251467726   CU074406,CH242-147C20,1:251446094-251470186
(Clone quality: bE147C20 on chr=1; Num_of_Contigs=8; )
TRIM15 ENSSSCG00000001235 7:24614675-24625850 CU311184,CH242-196B23,7:24509864-24676459
(Clone quality: bE196B23 on chr=7; Num_of_Contigs=3; )
 
TRIM2   ENSSSCG00000009008 8:64811415-64992439    
TRIM21   ENSSSCG00000014780 9:5122888-5130672   CU915729,CH242-257A21,9:5115921-5135602
(Clone quality: bE257A21 on chr=9; Num_of_Contigs=10; )
TRIM22 location ⇒ 9:3243031-3242709   CU856599,CH242-369B20,9:3224576-3283748
(Clone quality: bE369B20 on chr=9; Num_of_Contigs=3; )
TRIM22 location ⇒ 9:3247419-3247240   CU856599,CH242-369B20,9:3224576-3283748
(Clone quality: bE369B20 on chr=9; Num_of_Contigs=3; )
TRIM22 location ⇒ 9:3281816-3281733   CU856599,CH242-369B20,9:3224576-3283748
(Clone quality: bE369B20 on chr=9; Num_of_Contigs=3; )
TRIM23   ENSSSCG00000016948 16:41475694-41516472   CU856268,CH242-30E20,16:41457783-41623625
(Clone quality: bE30E20 on chr=16; Num_of_Contigs=2; )
TRIM24   ENSSSCG00000016518 18:9219702-9226597   FP236752,CH242-135G1,18:9218153-9282301
(Clone quality: bE135G1 on chr=18; Num_of_Contigs=4; )
TRIM25 ENSSSCG00000017614 12:31001929-31007597    
TRIM26 ENSSSCG00000001233 7:24577160-24599603 CU311184,CH242-196B23,7:24509864-24676459
(Clone quality: bE196B23 on chr=7; Num_of_Contigs=3; )
 
TRIM27   ENSSSCG00000001219 7:24193693-24211158 FP085562,CH242-160O9,7:24118819-24263585
(Clone quality: bE160O9 on chr=7; Num_of_Contigs=12; )
 
TRIM29   ENSSSCG00000015126 9:45975250-46001459    
TRIM3   ENSSSCG00000014625 9:2575350-2590957    
TRIM31 ENSSSCG00000001243 7:24788009-24800654 CT737425,CH242-47O8,7:24783186-24956885
(Clone quality: bE47O8 on chr=7; Num_of_Contigs=3; )
 
TRIM32 ENSSSCG00000005501 1:270344213-270346174   CU633594,CH242-470G22,1:270332056-270363194
(Clone quality: bE470G22 on chr=1; Num_of_Contigs=6; )
TRIM32 location ⇒ 1:270346122-270346598   CU633594,CH242-470G22,1:270332056-270363194
(Clone quality: bE470G22 on chr=1; Num_of_Contigs=6; )
TRIM33   ENSSSCG00000006757 4:110415642-110546010    
TRIM34 location ⇒ 9:3240970-3240842   CU856599,CH242-369B20,9:3224576-3283748
(Clone quality: bE369B20 on chr=9; Num_of_Contigs=3; )
TRIM34 location ⇒ 9:3243031-3242555   CU856599,CH242-369B20,9:3224576-3283748
(Clone quality: bE369B20 on chr=9; Num_of_Contigs=3; )
TRIM34 location ⇒ 9:3247411-3247240   CU856599,CH242-369B20,9:3224576-3283748
(Clone quality: bE369B20 on chr=9; Num_of_Contigs=3; )
TRIM34 location ⇒ 9:3281816-3281733   CU856599,CH242-369B20,9:3224576-3283748
(Clone quality: bE369B20 on chr=9; Num_of_Contigs=3; )
TRIM35   ENSSSCG00000009663 14:11151446-11169577   CT990535,CH242-108M15,14:11101852-11251924
(Clone quality: bE108M15 on chr=14; Num_of_Contigs=1; )
TRIM36   ENSSSCG00000014214 2:107965113-108008712   CU693413,CH242-277B14,2:107894653-108062188
(Clone quality: bE277B14 on chr=2; Num_of_Contigs=2; )
TRIM37   ENSSSCG00000017648 12:33297451-33431089    
TRIM38 ENSSSCG00000001110 7:21870677-21882440   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
TRIM38 location ⇒ 7:21872542-21873098   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
TRIM38 location ⇒ 7:21877609-21877840   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
TRIM38 location ⇒ 7:21879123-21879237   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
TRIM38 location ⇒ 7:21881776-21882463   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
TRIM39 ENSSSCG00000001342 7:26601660-26615656 CU498826,CH242-119D24,7:26553813-26728014
(Clone quality: bE119D24 on chr=7; Num_of_Contigs=31; )
 
TRIM4   ENSSSCG00000007637 3:6143601-6160459    
TRIM40 ENSSSCG00000001236 7:24643020-24653300 CU311184,CH242-196B23,7:24509864-24676459
(Clone quality: bE196B23 on chr=7; Num_of_Contigs=3; )
 
TRIM42   ENSSSCG00000011668 13:66367961-66393613    
TRIM44   ENSSSCG00000013295 2:23934759-24034216   CU464002,CH242-207F7,2:23876764-24061326
(Clone quality: bE207F7 on chr=2; Num_of_Contigs=2; )
TRIM45   ENSSSCG00000006732 4:107726765-107736827   CU207228,CH242-366F10,4:107617782-107740116
(Clone quality: bE366F10 on chr=4; Num_of_Contigs=2; )
TRIM46   ENSSSCG00000006526 4:98711676-98721495   CU179666,CH242-242M24,4:98705913-98751478
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
TRIM47   ENSSSCG00000017199 12:3896541-3900635   CU928029,CH242-304M1,12:3894544-3957078
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
TRIM5   ENSSSCG00000014670 9:3235129-3247419   CU856599,CH242-369B20,9:3224576-3283748
(Clone quality: bE369B20 on chr=9; Num_of_Contigs=3; )
TRIM55   ENSSSCG00000006216 4:71077209-71120342   CU550675,CH242-329I16,4:71045167-71242427
(Clone quality: bE329I16 on chr=4; Num_of_Contigs=1; )
TRIM58   ENSSSCG00000013958 2:64686221-64699249   CU856331,CH242-277E2,2:64677732-64702660
(Clone quality: bE277E2 on chr=2; Num_of_Contigs=5; )
TRIM59   ENSSSCG00000011732 13:78825517-78826728   CU466375,CH242-17F2,13:78718958-78854255
(Clone quality: bE17F2 on chr=13; Num_of_Contigs=7; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-8

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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