A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PSME2 location ⇒ 12:31149967-31150128   FP245413,CH242-143I10,12:31145193-31152858
(Clone quality: bE143I10 on chr=12; Num_of_Contigs=14; )
PSME2 location ⇒ 12:31150369-31151017   FP245413,CH242-143I10,12:31145193-31152858
(Clone quality: bE143I10 on chr=12; Num_of_Contigs=14; )
PSME3 ENSSSCG00000017385 12:17629889-17636034   CU928483,CH242-17I6,12:17616365-17641383
(Clone quality: bE17I6 on chr=12; Num_of_Contigs=8; )
PSME3 location ⇒ 12:3749443-3749515   CU694895,CH242-350N8,12:3733517-3750665
(Clone quality: bE350N8 on chr=12; Num_of_Contigs=14; )
PSME3 location ⇒ 12:5740014-5740102 CU929672,CH242-62J22,12:5703604-5857364
(Clone quality: bE62J22 on chr=12; Num_of_Contigs=4; ) 		 
PSME3 location ⇒ 12:6067446-6067370   CU855497,CH242-200J15,12:6019895-6100513
(Clone quality: bE200J15 on chr=12; Num_of_Contigs=3; )
PSME3 location ⇒ 12:6627635-6627715   CU928888,CH242-219F9,12:6621802-6639426
(Clone quality: bE219F9 on chr=12; Num_of_Contigs=24; )
PSME4 ENSSSCG00000008412 3:81171082-81235690   CU855592,CH242-276B14,3:81162359-81308523
(Clone quality: bE276B14 on chr=3; Num_of_Contigs=5; )
PSME4 location ⇒ 3:81209109-81209263   CU855592,CH242-276B14,3:81162359-81308523
(Clone quality: bE276B14 on chr=3; Num_of_Contigs=5; )
PSME4 location ⇒ 3:81211270-81211398   CU855592,CH242-276B14,3:81162359-81308523
(Clone quality: bE276B14 on chr=3; Num_of_Contigs=5; )
PSME4 location ⇒ 3:81212163-81212320   CU855592,CH242-276B14,3:81162359-81308523
(Clone quality: bE276B14 on chr=3; Num_of_Contigs=5; )
PSME4 location ⇒ 3:81213889-81213984   CU855592,CH242-276B14,3:81162359-81308523
(Clone quality: bE276B14 on chr=3; Num_of_Contigs=5; )
PSMF1 ENSSSCG00000007195 17:35875525-35917096    
PSMF1 location ⇒ 17:35875831-35875170   CU640412,CH242-289H12,17:35871993-35885483
(Clone quality: bE289H12 on chr=17; Num_of_Contigs=2; )
PSMG3   ENSSSCG00000007556 3:696931-699425   FP103050,CH242-177C19,3:686945-709629
(Clone quality: bE177C19 on chr=3; Num_of_Contigs=4; )
PSMG4   ENSSSCG00000001005 7:2770951-2778573   CT990543,CH242-241I16,7:2753264-2800733
(Clone quality: bE241I16 on chr=7; Num_of_Contigs=5; )
PSN2_PIG   ENSSSCG00000010860 10:14358486-14375721   CU633390,CH242-295A1,10:14311132-14441242
(Clone quality: bE295A1 on chr=10; Num_of_Contigs=1; )
PSORS1C2 ENSSSCG00000001390 7:27498491-27499664 CT737281,CH242-102G9,7:27394698-27581746
(Clone quality: bE102G9 on chr=7; Num_of_Contigs=3; ) 		 
PSP location ⇒ 17:38610135-38610282   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PSP location ⇒ 17:38611762-38611908   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PSP location ⇒ 17:38614177-38614329   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PSP location ⇒ 17:38619904-38620091   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PSPC1   ENSSSCG00000009569 11:79406293-79433949    
PSPH ENSSSCG00000007748 3:15429790-15455799    
PSPH ENSSSCG00000007259 17:38609213-38620092   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PSPH ENSSSCG00000007259 17:38609213-38620092   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PSPH location ⇒ 3:15446705-15446840   FP102600,CH242-175H12,3:15444259-15451598
(Clone quality: bE175H12 on chr=3; Num_of_Contigs=9; )
PSPH location ⇒ 3:15448512-15448661   FP102600,CH242-175H12,3:15444259-15451598
(Clone quality: bE175H12 on chr=3; Num_of_Contigs=9; )
PSPH location ⇒ 3:15450986-15451136   FP102600,CH242-175H12,3:15444259-15451598
(Clone quality: bE175H12 on chr=3; Num_of_Contigs=9; )
PSPH location ⇒ 3:15455304-15455501   FP102600,CH242-175H12,3:15451699-15464892
(Clone quality: bE175H12 on chr=3; Num_of_Contigs=9; )
PSPN ENSSSCG00000013540 2:49836016-49836312   CU929921,CH242-352E11,2:49825944-49850143
(Clone quality: bE352E11 on chr=2; Num_of_Contigs=12; )
PSPN ENSSSCG00000013540 2:49836016-49836312   CU929921,CH242-352E11,2:49825944-49850143
(Clone quality: bE352E11 on chr=2; Num_of_Contigs=12; )
PSPN location ⇒ 2:49836016-49836293   CU929921,CH242-352E11,2:49825944-49850143
(Clone quality: bE352E11 on chr=2; Num_of_Contigs=12; )
PSRC1   ENSSSCG00000006832 4:115304886-115308436   CU207229,CH242-373I13,4:115300001-115308788
(Clone quality: bE373I13 on chr=4; Num_of_Contigs=14; )
PSTK   ENSSSCG00000010721 14:138975726-138987606   CT956005,CH242-11G17,14:138966488-139020350
(Clone quality: bE11G17 on chr=14; Num_of_Contigs=9; )
PSTPIP1 ENSSSCG00000001867 7:62397796-62440268   CT868718,CH242-524I20,7:62378964-62491858
(Clone quality: bE524I20 on chr=7; Num_of_Contigs=2; )
PSTPIP1 location ⇒ 7:62398013-62398265   CT868718,CH242-524I20,7:62378964-62491858
(Clone quality: bE524I20 on chr=7; Num_of_Contigs=2; )
PSTPIP1 location ⇒ 7:62430688-62430794   CT868718,CH242-524I20,7:62378964-62491858
(Clone quality: bE524I20 on chr=7; Num_of_Contigs=2; )
PSTPIP1 location ⇒ 7:62438952-62439086   CT868718,CH242-524I20,7:62378964-62491858
(Clone quality: bE524I20 on chr=7; Num_of_Contigs=2; )
PSTPIP1 location ⇒ 7:62439984-62440268   CT868718,CH242-524I20,7:62378964-62491858
(Clone quality: bE524I20 on chr=7; Num_of_Contigs=2; )
PSTPIP2 ENSSSCG00000004495 1:99408731-99417141   CU855986,CH242-171G22,1:99401398-99424779
(Clone quality: bE171G22 on chr=1; Num_of_Contigs=18; )
PSTPIP2 location ⇒ 1:188087465-188087521   CU606975,CH242-251A8,1:188036812-188088768
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
PSTPIP2 location ⇒ 1:228874328-228874384   CU618324,CH242-276M24,1:228857825-228880847
(Clone quality: bE276M24 on chr=1; Num_of_Contigs=4; )
PSTPIP2 location ⇒ 1:99404430-99404325   CU855986,CH242-171G22,1:99401398-99424779
(Clone quality: bE171G22 on chr=1; Num_of_Contigs=18; )
PSTPIP2 location ⇒ 1:99613035-99612930   FP102300,CH242-145B4,1:99611669-99617334
(Clone quality: bE145B4 on chr=1; Num_of_Contigs=4; )
PTAFR ENSSSCG00000003625 6:62008694-62009722   FP236290,CH242-238K2,6:62005001-62016209
(Clone quality: bE238K2 on chr=6; Num_of_Contigs=9; )
PTAFR location ⇒ 6:62009771-62009116   FP236290,CH242-238K2,6:62005001-62016209
(Clone quality: bE238K2 on chr=6; Num_of_Contigs=9; )
PTAR1   ENSSSCG00000005252 1:233568627-233620820    
PTBP1   ENSSSCG00000013421 2:46234083-46244876    
PTBP2   ENSSSCG00000006880 4:125830478-125837924    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-1900, 1901-1950, 1951-2000, 2001-2050, 2051-2100, 2101-2150, 2151-2200, 2201-21

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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