A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U6   ENSSSCG00000019237 13:55441839-55441942   CU464019,CH242-82C2,13:55403896-55455839
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
U6   ENSSSCG00000019099 4:82219933-82220033   CU582881,CH242-218H22,4:82149233-82223644
(Clone quality: bE218H22 on chr=4; Num_of_Contigs=6; )
U6   ENSSSCG00000020034 13:103935093-103935202   CU928305,CH242-101M7,13:103898509-103942005
(Clone quality: bE101M7 on chr=13; Num_of_Contigs=4; )
U6   ENSSSCG00000019096 13:76632206-76632311   CU914328,CH242-3I2,13:76628530-76639765
(Clone quality: bE3I2 on chr=13; Num_of_Contigs=8; )
U6   ENSSSCG00000020035 14:25708378-25708484   CT998547,CH242-428G11,14:25685837-25763708
(Clone quality: bE428G11 on chr=14; Num_of_Contigs=3; )
U6   ENSSSCG00000019076 6:74540893-74540999   FP104540,CH242-56I12,6:74530108-74543921
(Clone quality: bE56I12 on chr=6; Num_of_Contigs=3; )
U6   ENSSSCG00000019077 7:35497475-35497581   CU468445,CH242-84M24,7:35449601-35509483
(Clone quality: bE84M24 on chr=7; Num_of_Contigs=5; )
U6   ENSSSCG00000019080 2:129287342-129287452   CU459055,CH242-430O11,2:129241445-129341031
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
U6   ENSSSCG00000019081 17:46133393-46133499   FP236782,CH242-252F19,17:46128311-46136431
(Clone quality: bE252F19 on chr=17; Num_of_Contigs=9; )
U6   ENSSSCG00000019082 17:51381474-51381573   CU694777,CH242-20L5,17:51378453-51387982
(Clone quality: bE20L5 on chr=17; Num_of_Contigs=7; )
U6   ENSSSCG00000019084 9:103799464-103799570   CU640471,CH242-317P13,9:103757559-103818458
(Clone quality: bE317P13 on chr=9; Num_of_Contigs=3; )
U6   ENSSSCG00000019126 1:46823828-46823942   CU407116,CH242-348P6,1:46814643-46827887
(Clone quality: bE348P6 on chr=1; Num_of_Contigs=11; )
U6   ENSSSCG00000019119 1:226935445-226935551   CU928554,CH242-181K22,1:226929418-226944155
(Clone quality: bE181K22 on chr=1; Num_of_Contigs=4; )
U6   ENSSSCG00000020029 15:33765978-33766086   CU463815,CH242-441M3,15:33757101-33770169
(Clone quality: bE441M3 on chr=15; Num_of_Contigs=4; )
U6   ENSSSCG00000019238 6:38782246-38782352   FP101998,CH242-138A14,6:38778129-38788865
(Clone quality: bE138A14 on chr=6; Num_of_Contigs=18; )
U6   ENSSSCG00000019263 7:76763821-76763927 CT737335,CH242-138I10,7:76665604-76836435
(Clone quality: bE138I10 on chr=7; Num_of_Contigs=1; ) 		 
U6   ENSSSCG00000020017 X:19896002-19896105   FP245425,CH242-81O20,X:19889555-19897423
(Clone quality: bE81O20 on chr=X; Num_of_Contigs=3; )
U6   ENSSSCG00000019369 11:63242843-63242949   CU896539,CH242-507A14,11:63223641-63244329
(Clone quality: bE507A14 on chr=11; Num_of_Contigs=3; )
U6   ENSSSCG00000019101 3:64079678-64079786   CU694919,CH242-470L19,3:64065764-64086072
(Clone quality: bE470L19 on chr=3; Num_of_Contigs=6; )
U6   ENSSSCG00000019102 10:14054178-14054284   CU914379,CH242-206B3,10:14028575-14068754
(Clone quality: bE206B3 on chr=10; Num_of_Contigs=3; )
U6   ENSSSCG00000019103 4:113840446-113840552   CU207230,CH242-384H21,4:113750654-113878957
(Clone quality: bE384H21 on chr=4; Num_of_Contigs=7; )
U6   ENSSSCG00000019104 11:66217784-66217888   CT956037,CH242-150D7,11:66181376-66273135
(Clone quality: bE150D7 on chr=11; Num_of_Contigs=6; )
U6   ENSSSCG00000019108 5:53430169-53430275   CU861604,CH242-209P20,5:53413497-53433264
(Clone quality: bE209P20 on chr=5; Num_of_Contigs=12; )
U6   ENSSSCG00000020032 11:46685207-46685314   CU466967,CH242-408C4,11:46684491-46692410
(Clone quality: bE408C4 on chr=11; Num_of_Contigs=19; )
U6   ENSSSCG00000019085 16:70552300-70552403   CU928060,CH242-267O10,16:70529986-70566506
(Clone quality: bE267O10 on chr=16; Num_of_Contigs=2; )
U6   ENSSSCG00000019095 15:58883408-58883511   CU855494,CH242-174O23,15:58871068-58917427
(No clone quality info on )
U6   ENSSSCG00000019147 13:70342312-70342418   CU468880,CH242-513O5,13:70307780-70349104
(Clone quality: bE513O5 on chr=13; Num_of_Contigs=4; )
U6   ENSSSCG00000020026 3:119152355-119152460   CU896680,CH242-527F16,3:119122860-119159787
(Clone quality: bE527F16 on chr=3; Num_of_Contigs=6; )
U6   ENSSSCG00000019130 11:49510114-49510215   CU915309,CH242-146E12,11:49430083-49516785
(Clone quality: bE146E12 on chr=11; Num_of_Contigs=3; )
U6   ENSSSCG00000019131 15:19649089-19649195   FP102423,CH242-143C14,15:19600532-19671753
(Clone quality: bE143C14 on chr=15; Num_of_Contigs=2; )
U6   ENSSSCG00000019132 15:49535210-49535315   CU466992,CH242-23P22,15:49534433-49548857
(Clone quality: bE23P22 on chr=15; Num_of_Contigs=5; )
U6   ENSSSCG00000019137 X:87657791-87657898   FP015865,CH242-35P3,X:87637113-87665330
(Clone quality: bE35P3 on chr=X; Num_of_Contigs=6; )
U6   ENSSSCG00000019139 1:246816107-246816213   CU915495,CH242-38L5,1:246801644-246819597
(Clone quality: bE38L5 on chr=1; Num_of_Contigs=9; )
U6   ENSSSCG00000020024 9:113259450-113259556   CU633555,CH242-205J12,9:113249588-113260948
(Clone quality: bE205J12 on chr=9; Num_of_Contigs=9; )
U6   ENSSSCG00000019144 6:89890837-89890943   CU462944,CH242-326G7,6:89848932-89911804
(Clone quality: bE326G7 on chr=6; Num_of_Contigs=2; )
U6   ENSSSCG00000019145 X:43529473-43529576   CU914633,CH242-147G7,X:43527526-43539240
(Clone quality: bE147G7 on chr=X; Num_of_Contigs=4; )
U6   ENSSSCG00000019148 15:19476961-19477067   FP102428,CH242-15C24,15:19474464-19480250
(Clone quality: bE15C24 on chr=15; Num_of_Contigs=6; )
U6   ENSSSCG00000019149 3:11486381-11486489   FP102635,CH242-228F6,3:11442689-11588943
(Clone quality: bE228F6 on chr=3; Num_of_Contigs=1; )
U6   ENSSSCG00000020018 9:9222256-9222353   CU655994,CH242-280C8,9:9214468-9238052
(Clone quality: bE280C8 on chr=9; Num_of_Contigs=8; )
U6   ENSSSCG00000019127 14:2301720-2301826   CT990612,CH242-266O18,14:2292845-2310254
(Clone quality: bE266O18 on chr=14; Num_of_Contigs=7; )
U6   ENSSSCG00000019128 2:36585705-36585811   CU694797,CH242-375D19,2:36575585-36589973
(Clone quality: bE375D19 on chr=2; Num_of_Contigs=10; )
U6   ENSSSCG00000019152 X:35629641-35629749 FP102377,CH242-254N18,X:35628331-35638286
(Clone quality: bE254N18 on chr=X; Num_of_Contigs=5; ) 		 
U6   ENSSSCG00000019153 6:68413203-68413311   CU655932,CH242-335I24,6:68345779-68416624
(Clone quality: bE335I24 on chr=6; Num_of_Contigs=3; )
U6   ENSSSCG00000019156 9:119148675-119148780   CU633393,CH242-2E18,9:119140137-119167338
(Clone quality: bE2E18 on chr=9; Num_of_Contigs=5; )
U6   ENSSSCG00000019158 X:55243340-55243446   CU694546,CH242-145J20,X:55228215-55248382
(Clone quality: bE145J20 on chr=X; Num_of_Contigs=2; )
U6   ENSSSCG00000020021 6:119633200-119633306   CU457496,CH242-64E21,6:119558390-119734602
(Clone quality: bE64E21 on chr=6; Num_of_Contigs=1; )
U6   ENSSSCG00000019164 1:241781346-241781449   CU463116,CH242-290M22,1:241766696-241831478
(Clone quality: bE290M22 on chr=1; Num_of_Contigs=5; )
U6   ENSSSCG00000019169 4:41997945-41998051   CU407168,CH242-230I12,4:41827613-42007263
(Clone quality: bE230I12 on chr=4; Num_of_Contigs=1; )
U6   ENSSSCG00000019172 16:38374973-38375070   CU915453,CH242-175K21,16:38332354-38527051
(Clone quality: bE175K21 on chr=16; Num_of_Contigs=1; )
U6   ENSSSCG00000019176 10:12121658-12121758   FP236771,CH242-110I8,10:12120629-12126247
(Clone quality: bE110I8 on chr=10; Num_of_Contigs=15; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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