A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 11601 - 11700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
SPIN1 ENSSSCG00000007809 3:16742604-16878319    
SPIN3   ENSSSCG00000012356 X:48899458-48900234   FP102619,CH242-203B18,X:48898359-48914002
(Clone quality: bE203B18 on chr=X; Num_of_Contigs=9; )
SPINK4 ENSSSCG00000010997 10:31771645-31849736    
SPINK5 ENSSSCG00000014422 2:134917206-134987375    
SPINK6   ENSSSCG00000014424 2:135082825-135096586   FP017134,CH242-150P12,2:134967630-135167107
(Clone quality: bE150P12 on chr=2; Num_of_Contigs=1; )
SPINK8   ENSSSCG00000011348 13:25965372-25971012   FP102065,CH242-145E9,13:25960235-25992417
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
SPINK9   ENSSSCG00000014426 2:135187923-135192446   FP089465,CH242-369H11,2:135172108-135216486
(Clone quality: bE369H11 on chr=2; Num_of_Contigs=4; )
SPINT1   ENSSSCG00000004759 1:136950626-136970289    
SPINT2   ENSSSCG00000007420 17:50026822-50026971   CU076086,CH242-56C16,17:49960216-50115189
(Clone quality: bE56C16 on chr=17; Num_of_Contigs=2; )
SPINT4   ENSSSCG00000007419 17:50002109-50004608   CU076086,CH242-56C16,17:49960216-50115189
(Clone quality: bE56C16 on chr=17; Num_of_Contigs=2; )
SPIRE1   ENSSSCG00000003675 6:66406497-66420890    
SPIRE2   ENSSSCG00000002635 6:36752-392496    
SPN ENSSSCG00000012850 2:238775-261809   FP015900,CH242-40P17,2:201823-266668
(Clone quality: bE40P17 on chr=2; Num_of_Contigs=6; )
SPN ENSSSCG00000017584 12:24727275-24742760    
SPNS1   ENSSSCG00000007809 3:16742604-16878319    
SPNS2   ENSSSCG00000017879 12:47634040-47663202   CU929689,CH242-152D18,12:47633596-47731471
(Clone quality: bE152D18 on chr=12; Num_of_Contigs=5; )
SPNS3   ENSSSCG00000017880 12:47672232-47728171   CU929689,CH242-152D18,12:47633596-47731471
(Clone quality: bE152D18 on chr=12; Num_of_Contigs=5; )
SPO11   ENSSSCG00000007502 17:60266160-60281288 CR956362,CH242-98D1,17:60206269-60416771
(No clone quality info on bE98D1) 		 
SPOCD1   ENSSSCG00000003606 6:60701999-60726958    
SPOCK ENSSSCG00000014320 2:126314111-126493184    
SPOCK1   ENSSSCG00000014320 2:126314111-126493184    
SPOCK2   ENSSSCG00000010283 14:78123712-78133143   CU469117,CH242-331I9,14:78120132-78134401
(Clone quality: bE331I9 on chr=14; Num_of_Contigs=11; )
SPOCK3   ENSSSCG00000009722 14:21490946-21857061    
SPON1 ENSSSCG00000013393 2:41893073-41915049   CU457766,CH242-56H24,2:41886980-41993443
(Clone quality: bE56H24 on chr=2; Num_of_Contigs=26; )
SPOP   ENSSSCG00000017547 12:22922300-22932267   FP015993,CH242-478C13,12:22918428-22950747
(Clone quality: bE478C13 on chr=12; Num_of_Contigs=11; )
SPOPL   ENSSSCG00000015683 15:11661951-11681654    
SPP1 ENSSSCG00000004517 1:102963474-102968962   CU914451,CH242-152J17,1:102889373-103019647
(Clone quality: bE152J17 on chr=1; Num_of_Contigs=3; )
SPP1 ENSSSCG00000005111 1:203357008-203366758   CU618319,CH242-25H18,1:203352954-203375604
(Clone quality: bE25H18 on chr=1; Num_of_Contigs=12; )
SPP1 ENSSSCG00000009216 8:112396255-112600779    
SPP2   ENSSSCG00000016315 15:127041085-127186101    
SPR   ENSSSCG00000008309 3:64096794-64101838    
SPRED1 ENSSSCG00000004793 1:139642786-139697760    
SPRED2   ENSSSCG00000008357 3:70488199-70520381    
SPRED3   ENSSSCG00000002958 6:32512365-32517595   FP236590,CH242-507G2,6:32461085-32547641
(Clone quality: bE507G2 on chr=6; Num_of_Contigs=4; )
SPRY1 ENSSSCG00000009083 8:86572288-86573247   CU627982,CH242-25A12,8:86564543-86578966
(Clone quality: bE25A12 on chr=8; Num_of_Contigs=11; )
SPRY2   ENSSSCG00000009482 11:51317395-51318342   CU019591,CH242-459E17,11:51316658-51335285
(Clone quality: bE459E17 on chr=11; Num_of_Contigs=7; )
SPRY3   ENSSSCG00000012805 X:123095372-123096238 CU914687,CH242-92A22,X:123079486-123279612
(Clone quality: bE92A22 on chr=X; Num_of_Contigs=11; ) 		 
SPRY4   ENSSSCG00000014397 2:130591626-130592525   FP085601,CH242-263D23,2:130537541-130689057
(Clone quality: bE263D23 on chr=2; Num_of_Contigs=3; )
SPRYD3   ENSSSCG00000000262 5:16969902-16984781    
SPRYD4   ENSSSCG00000000404 5:20979495-20990348    
SPSB3   ENSSSCG00000008015 3:35885199-35921315    
SPTA1 ENSSSCG00000006431 4:95123703-95187441    
SPTAN1 ENSSSCG00000005654 1:283617055-283683474    
SPTB ENSSSCG00000002277 7:97296536-97373896   CT737370,CH242-45A22,7:97273887-97416999
(Clone quality: bE45A22 on chr=7; Num_of_Contigs=1; )
SPTBN2 ENSSSCG00000012928 2:4043508-4051227   CU928093,CH242-168G1,2:4042694-4052323
(Clone quality: bE168G1 on chr=2; Num_of_Contigs=25; )
SPTBN5   ENSSSCG00000004736 1:135808513-135858068   CU468106,CH242-259N12,1:135806545-135912956
(Clone quality: bE259N12 on chr=1; Num_of_Contigs=8; )
SPTLC1   ENSSSCG00000009594 14:3487545-3583668    
SPTLC2   ENSSSCG00000002404 7:108673810-108724874    
SPTLC3   ENSSSCG00000007072 17:22080913-22182455    
SPTY2D1   ENSSSCG00000013361 2:37768979-37774111   CU915335,CH242-299H5,2:37768972-37817128
(Clone quality: bE299H5 on chr=2; Num_of_Contigs=5; )
SPZ1   ENSSSCG00000014122 2:78392438-78393586   CU896535,CH242-174M6,2:78383909-78395477
(Clone quality: bE174M6 on chr=2; Num_of_Contigs=16; )
SQLE   ENSSSCG00000005970 4:14332677-14365215    
SQSTM1 ENSSSCG00000014016 2:68101464-68112459 CU639394,CH242-198P20,2:67907486-68117033
(Clone quality: bE198P20 on chr=2; Num_of_Contigs=3; ) 		 
SR140   ENSSSCG00000011684 13:68255017-68300465   CU914238,CH242-182G22,13:68254760-68335472
(Clone quality: bE182G22 on chr=13; Num_of_Contigs=5; )
SRA1   ENSSSCG00000014365 2:129315328-129321316   CU459055,CH242-430O11,2:129241445-129341031
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
SRBD1   ENSSSCG00000008445 3:88353435-88549518    
SRC ENSSSCG00000007334 17:42850894-42870771    
SRCAP   ENSSSCG00000007789 3:16296731-16332652    
SRCIN1   ENSSSCG00000018056 12:57185825-57230312   FP067348,CH242-54E8,12:57159732-57237745
(Clone quality: bE54E8 on chr=12; Num_of_Contigs=10; )
SRCRB4D ENSSSCG00000007694 3:8534477-8544502    
SRD5A1   ENSSSCG00000017103 16:72686319-72709458    
SRD5A2   ENSSSCG00000008521 3:101177771-101189231    
SRD5A3   ENSSSCG00000008845 8:36367267-36384530   FP016165,CH242-16E23,8:36348269-36392852
(Clone quality: bE16E23 on chr=8; Num_of_Contigs=5; )
SRF ENSSSCG00000001661 7:44060665-44068357 CR974479,PigE-150P18,7:44038129-44188858
(Clone quality: bT150P18 on chr=7; Num_of_Contigs=4; ) 		 
SRF ENSSSCG00000001674 7:44482572-44490295   CU633197,CH242-208A12,7:44468928-44491614
(Clone quality: bE208A12 on chr=7; Num_of_Contigs=8; )
SRF ENSSSCG00000003881 6:116750667-116836008    
SRGAP1 ENSSSCG00000000463 5:28242156-28250371   CU463965,CH242-324I12,5:28139329-28252131
(Clone quality: bE324I12 on chr=5; Num_of_Contigs=2; )
SRGAP2 ENSSSCG00000000463 5:28242156-28250371   CU463965,CH242-324I12,5:28139329-28252131
(Clone quality: bE324I12 on chr=5; Num_of_Contigs=2; )
SRGN ENSSSCG00000010249 14:75329507-75346802    
SRI   ENSSSCG00000015298 9:63887349-63902649   CU695059,CH242-345H3,9:63879805-64040257
(Clone quality: bE345H3 on chr=9; Num_of_Contigs=1; )
SRL   ENSSSCG00000007949 3:34146708-34157800   FP089483,CH242-216B18,3:34139809-34181580
(Clone quality: bE216B18 on chr=3; Num_of_Contigs=4; )
SRM   ENSSSCG00000003411 6:48024205-48027317    
SRP19   ENSSSCG00000014206 2:105620817-105628084   CU856120,CH242-510G20,2:105607531-105633212
(Clone quality: bE510G20 on chr=2; Num_of_Contigs=10; )
SRP54   ENSSSCG00000001955 7:70619949-70668714    
SRP68   ENSSSCG00000017191 12:3726699-3760988    
SRP72   ENSSSCG00000008900 8:47111232-47142651   CU606852,CH242-220F7,8:47084665-47178142
(Clone quality: bE220F7 on chr=8; Num_of_Contigs=9; )
SRPK1   ENSSSCG00000001554 7:36268680-36330279    
SRPRB   ENSSSCG00000011639 13:61486750-61519167   CU633685,CH242-265M20,13:61378623-61549248
(Clone quality: bE265M20 on chr=13; Num_of_Contigs=2; )
SRPX ENSSSCG00000012234 X:33531792-33650133    
SRPX2   ENSSSCG00000012482 X:75680819-75707940   CU207261,CH242-166I17,X:75651367-75713469
(Clone quality: bE166I17 on chr=X; Num_of_Contigs=6; )
SRP_euk_arch   ENSSSCG00000018176 3:93758083-93758381    
SRP_euk_arch   ENSSSCG00000018426 13:76081109-76081407   CU466509,CH242-517N1,13:76026848-76122515
(Clone quality: bE517N1 on chr=13; Num_of_Contigs=3; )
SRP_euk_arch   ENSSSCG00000018788 1:187872885-187873181   CU633502,CH242-240C20,1:187832890-187878221
(Clone quality: bE240C20 on chr=1; Num_of_Contigs=4; )
SRP_euk_arch   ENSSSCG00000018901 1:228874107-228874403   CU618324,CH242-276M24,1:228857825-228880847
(Clone quality: bE276M24 on chr=1; Num_of_Contigs=4; )
SRP_euk_arch   ENSSSCG00000019100 5:82105518-82105796   CU457471,CH242-277A17,5:82103159-82108485
(Clone quality: bE277A17 on chr=5; Num_of_Contigs=4; )
SRP_euk_arch   ENSSSCG00000019312 8:35666766-35667061   FP015961,CH242-68J9,8:35666593-35707684
(Clone quality: bE68J9 on chr=8; Num_of_Contigs=5; )
SRP_euk_arch   ENSSSCG00000019407 1:188101726-188102022   CU606975,CH242-251A8,1:188088869-188146416
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
SRP_euk_arch   ENSSSCG00000019545 5:81985086-81985364   FP102267,CH242-81I11,5:81855271-82016430
(Clone quality: bE81I11 on chr=5; Num_of_Contigs=1; )
SRP_euk_arch   ENSSSCG00000019622 13:28805793-28806089   CU914695,CH242-195P19,13:28772257-28826761
(Clone quality: bE195P19 on chr=13; Num_of_Contigs=14; )
SRP_euk_arch   ENSSSCG00000019736 7:24236112-24236406 FP085562,CH242-160O9,7:24118819-24263585
(Clone quality: bE160O9 on chr=7; Num_of_Contigs=12; ) 		 
SRP_euk_arch   ENSSSCG00000019855 9:105844955-105845260   CU693385,CH242-143F22,9:105742784-105878546
(Clone quality: bE143F22 on chr=9; Num_of_Contigs=2; )
SRP_euk_arch   ENSSSCG00000019995 1:188087244-188087540   CU606975,CH242-251A8,1:188036812-188088768
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
SRR   ENSSSCG00000017827 12:45848928-45855592   CU640470,CH242-300A22,12:45800890-45898822
(Clone quality: bE300A22 on chr=12; Num_of_Contigs=5; )
SRRD   ENSSSCG00000009961 14:44815970-44838730    
SRRM1   ENSSSCG00000003545 6:56792395-56826807    
SRRM4   ENSSSCG00000009846 14:33901249-33912313   CU856553,CH242-13D3,14:33898331-33916043
(Clone quality: bE13D3 on chr=14; Num_of_Contigs=22; )
SRRM5   ENSSSCG00000003060 6:34955504-34957372   FP102604,CH242-184P4,6:34931170-34967938
(No clone quality info on )
SS18   ENSSSCG00000003716 6:76243402-76320545    
SS18L2   ENSSSCG00000011283 13:21979641-21982806   CU928031,CH242-357P22,13:21974185-22006928
(Clone quality: bE357P22 on chr=13; Num_of_Contigs=3; )
SSA1 ENSSSCG00000014780 9:5122888-5130672   CU915729,CH242-257A21,9:5115921-5135602
(Clone quality: bE257A21 on chr=9; Num_of_Contigs=10; )
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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