| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | 30.9 (cM) |
| QTL Span: | 21.9-42.7 (cM)
16.3-31.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | MCMA1 |
| Peak: | 30.9 |
| Lower, "Significant": | ADCY1AP |
| Lower, "Suggestive": | n/a |
| Marker type: | Microsatellites |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | n/a |
 |
F_Stat | 14 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | 940 lambs from 5 half-sib families;selective genotyping (22 top, 22 bottom per sire); genome screen 203 microsatellites; all offspring then genotyped for chromosomes 1, 3, 4, 5, 8, 12, 13, 22 and 23 |
| Breeds associated:
n/a
|
| Design: | outcross; 2 natural pasture challenges |
| Analysis: | worm counts and fecs log transformed (ln(x+c) where x=count and c=unit count); Nematodirus counts scaled to average s.d. after log transformation
total IgE log transformed
least squares interval mapping - Haley-Knott regression |
| Software: | |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Crawford AM,Paterson KA, Dodds KG, Diez Tascon C, Williamson PA, Roberts Thomson M, Bisset SA, Beattie AE, Greer GJ, Green RS, W |
| Affiliation: | AgResearch, Invermay Agricultural Centre, Private Bag 50034, Mosgiel, New Zealand. allan.crawford@agresearch.co.nz |
| Title: | Discovery of quantitative trait loci for resistance to parasitic nematode infection in sheep: I. Analysis of outcross pedigrees. |
| Journal: | BMC Genomics, 2006, 7:178 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | T. colubriformus IgG 4 weeks into second field challenge; single sire 92/0154 348 progeny; effect size 0.07 ± 0.02 |
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