| QTL Map Information |
|---|
| Chromosome: | 20 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
49.3-49.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs410477651 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #285204
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Rambouillet and Dorper x White Dorper lambs. |
| Breeds associated:
|
| Design: | Animals were subjected to either a natural or artificial parasite challenge. They were genotyped using with the Axiom Ovine Genotyping 50K array or the AgResearch Sheep Genomics 60K SNP chip, and association analyses were performed for traits related to gastrointestinal nematode infection. A total of 40,598 SNPs were used for analysis. |
| Analysis: | Additive and recessive models were used for GWAS. |
| Software: | PLINK v1.90, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Thorne JW, Redden R, Bowdridge SA, Becker GM, Stegemiller MR, Murdoch BM |
| Affiliation: | Department of Animal, Veterinary and Food Sciences, University of Idaho, Moscow, ID 83844, USA |
| Title: | Genome-Wide Analysis of Sheep Artificially or Naturally Infected with Gastrointestinal Nematodes |
| Journal: | Genes, 2023, 14(7):1342 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | recessive model |
User inputs on reference #37510248
Add your comments
Note similar findings
Note contradictions
|
