| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs409437281 |
| Peak: | |
| Lower, "Significant": | rs403248164 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.6991% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Santa Ines sheep. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina Ovine SNP50 Genotyping BeadChip, and GWAS were performed for traits related to gastrointestinal nematode resistance. A total of 37,511 SNPs were used for analysis. |
| Analysis: | Weighted, single-step SWAS was performed using genomic best linear unbiased prediction (GBLUP) and an animal model. |
| Software: | AIREMLF90, BLUPF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Stafuzza NB, Freitas AC, Mioto MB, Silva RMO, Fragomeni BO, Pedrosa VB, Costa RLDD, Paz CCP |
| Affiliation: | Sustainable Livestock Research Center, Animal Science Institute, 15130-000 São José do Rio Preto, SP, Brazil |
| Title: | Weighted single-step genome-wide association study and functional enrichment analyses for gastrointestinal nematode resistance traits in Santa Ines sheep |
| Journal: | Veterinary parasitology, 2023, 323: 110047 |
| Links: |
PubMed | Abstract | List all data
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