Pig QTL Database

Release 56
(Apr 24, 2025)

QTL 17896 Description:

Trait Information

Trait name: Hematocrit Vertebrate Trait Ontology: n/a

Reported name: hematocrit Product Trait Ontology: n/a

Symbol: HCT Clinical Measurement Ontology: Hematocrit

QTL Map Information

Chromosome: 13

QTL Peak Location: 124.1 (cM)

QTL Span: 123.48-123.49 (cM)
207.6-207.6 (Mbp)

Upper, "Suggestive": n/a

Upper, "Significant": n/a

Peak:

Lower, "Significant": n/a

Lower, "Suggestive": n/a

Marker type:

Analysis type: Association

Model tested: Mendelian

Test base: n/a

Threshold significance level: Significant

P_values <0.05
Dominance effect: n/a

Additive effect: n/a

Associated Gene: MX1 (myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse))

Cis/Trans acting type:

Links: NCBI GeneDB | Edit | Map view

Extended information:

(none)

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QTL Experiment in Brief

Animals: Animals were Landrace pigs.

Breeds associated:
Landrace

Design: Animals were genotyped for five SNPs in BAT2, Mx1, and CXCL12 and analyzed for immunological traits.

Analysis: Mixed models were used.

Software: SAS

Notes:

Links: Edit

Reference

Authors: Wang SJ, Liu WJ, Sargent CA, Zhao SH, Liu HB, Liu XD, Wang C, Hua GH, Yang LG, Affara NA, Zhang SJ

Affiliation: Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education, Huazhong Agriculture University, Wuhan, Hubei 430070, China

Title: Effects of the polymorphisms of Mx1, BAT2 and CXCL12 genes on immunological traits in pigs

Journal: Mol Biol Rep, 2012, 39(3):2417-27

Links: PubMed | Abstract | List all data | Edit

Additional Information

Comments: c.86172+140C>T; day 17

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Cite this Data:
Animal QTLdb: QTL17896 was published in 2012, and was curated into QTLdb on 2012-08-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:17896